| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51290 |
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| Symbol | RHD1 |
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| ID | 4850895 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 356987 |
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| End bp | 359440 |
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| Gene Length | 2454 bp |
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| Protein Length | 533 aa |
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| Translation table | |
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| GC content | 38% |
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| IMG OID | 640392603 |
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| Product | Repressed in Hyphal Development |
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| Protein accession | XP_001387307 |
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| Protein GI | 126273855 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.502969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.608739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATAGAATTC CCGTATGGAA ATTTATTTTA TTACATGAAC ATATTCAACT TCTGCATTTC
CTATTCGGTT CGTGCCTCCC AATTGTGACA AAAATATTAT TGTAAAAAAT ATCAGCCTTC
AAAATACGAA AAGGCGTGGT ACTTTTTGAC GCACTCGTCC ACTCGTCTAT TAGGAGAGAC
GGAATCTCAC TTTTTGGGCC ACGTTTTGAC AAAAAGTGTG CTTCTAGTAG TGACTGTGGA
CATTTGGGAA CAGAGCTCAT CCAGGAGTGG GATCTTCTAG AAATCTATGT TCTTGTCTCT
TCTTCTAGAG GACTAAACTT GCAGATCACA TAAAAAGCCC TATATGCTAG ACTAATCGAA
AGAGGCTTAA TTTGAGTTCA GGCGCCCAAC AGTATAAGAA AGAAAGATTT GTAATAGTCC
TGTGGTTTTC TATAATATCC CTAATTTTGA ATGCACGACA ACACTCTTTT TACGAAATAT
GTTATTTTTT AAGTATACTT GCTGAATTAG TTTTCCACTA GAATTCTAGG TAGAAAATTG
GGCAAGTATA TATTTAGAAC ATTTACAGAT TGAAATCTCT GCCAAGAACT TTAAGAAGGG
ATTCAGGTTT TGATTCTTCT GGGGTCAGCT GCAGTTCGAT TTGTCAACCA TTGTTACATG
CTTCTTGTTC AATTCTAAAT CTACTTTATA GGAAAATGAG GAGAGAAGGA GGAGAGAAGG
AGGAAAGAAA GAAGTAGCTA TTTAATTAGC AAAGCAAGCA ATGTTCTTCC CTAATCTTGG
TAGCTAATCC TCAAGCAAAA GACCATGTCG GAATGGGAAC CAATTACTGT AAAACACTAT
GTACAATCGG AGTTGATGCT CCTCCCAGCA ATTGGCTTGG GACTAGTATA TGTTGCCCTA
AAAGCTAAGA ACTTGCAGCA AAATCTTAAG GCTGTCAGTA GAAGAACCAT GCTAATTATG
GTAGCCATGT TTACTATTAC GGTATTAACA ACTTTCATTT CTCAAAAAAA GAAAGCACAG
AGTTCTCCGT TCAGCAAGCT TATGCTTGAG CAGAAGTATT CACAGGTGCA ATTGTCTGGA
TATTCAATCA TAGAGAACCT GCCCGATCTT GACTACAAAA CTCTTGAATG CAAGGATTCC
TACTTTGAAG ATAATTCCAG TGTTAGGTCC AGTTCGCCAC TTCGCATAGG TAATTCTAAT
GACGTTAAAA GAGTAAGAGA TTCCGTGCTT GAATTGCTTA GACTGGGAAA GGATGACACT
CTTAAAAATT GTTTCCAGGA TAAAGAAGAT GAGACTGAGG AATACATATT GGAAAAGAAA
TGGTACAAAT TCTGTGGGGG ATCAGTGTGG CTAGACAAGT TCCAAGTTCA TTACTACACT
AATAGAATTG TATACTCTAA TTTTAGTAGA GCAGATAAAC CTAATATGCT GTTGGTGTAT
ATTCAAATCT TCGATAAGAA TTGGAATGAA ATCGAAGGGT ATAAATTCGA CAATTCTGAT
ATAACATATC CTTGCATCTT ACCTATCAAG AATACCGTCG TTAGTTCTCT GAAAAATTTG
GGAATTGAAG ACCCACGAAT TTTGCTTCGT ACCTTTCAGA ATGAAACTAC TAGACAAATG
GAGCAGGAAC CTGTTATTGT ATATAATTCA AAGCATGAGG GTATTAAGAG ACGAGTCTTT
GTATATAGAC CTTTCCAGAA TGCTCATTCT GACATTATGT TGAAATCCAA TAGCTTCAAA
TTGAGAAACA CAGAAAAGAA TTGGGCTCCC TTCTTTGACA CTGACAATCC TAAAGATATC
TTCCTAATTT ACCAGTTCAG CCCTCTTGCG ATTTTGAGAT GTTCTCTTGA CACTGGGAAC
TGCGAACTCA CGGATAAATC ACTATCCGAT GAAATAAACG CAGCCACAAA AAGTAAGATG
GGCAGTTTAA GAGGAGGATC CAATTTGATA GAAGTCCCGC CAGCTATCGT GCCCAAGGAG
TTGAATAGGA AGTTCTGGTT AGGCTTAGCC CGATCAACCA ATCGTAAGAC TGGATGTCTC
AAAGTTGGAT ACCGCCCACA TATAGTAATG CTTTCAAAAC CTAAACATAA AAATGGTCGT
TTCAGGTTTG ACTACGTCAG TTCGCTTCTA GACTTCAGTA TTACTCCAGA ATTGTGGGAT
CCCAGAAAAA ACGACTTCTG CAAGGATGGA AAGAGTGTAC TCATACCCAA TTCGATTGAT
TCGTGGAATT TCGTAAAATC AAGGTTTGAG GAGTTGGGAC ATGACTTAAT GACAATTACT
TTATCACAAG CAGATCGGTA CAATGACGTG ATATTTGTTA GAGGAATGTT GGATCATCTA
CGGGCAGTAT TGAAAGGAGA TGTTCGGAAG ATGAGAGACC ATTTCCAGCA AGAGAAGTCC
GAGGAACAGA GTATCTATCT AAGTAAATGT TCCAATAGCT TGAGTGACAA ATAT
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| Protein sequence | NRIPVWKFIL LHEHIQLLHF LFGSVLLVVT VDIWEQSSSR IDAPPSNWLG TSISQSSPFS
KLMLEQKYSQ VQLSGYSIIE NLPDLDYKTL ECKDSYFEDN SSVRSSSPLR IGNSNDVKRV
RDSVLELLRL GKDDTLKNCF QDKEDETEEY ILEKKWYKFC GGSVWLDKFQ VHYYTNRIVY
SNFSRADKPN MLLVYIQIFD KNWNEIEGYK FDNSDITYPC ILPIKNTVVS SLKNLGIEDP
RILLRTFQNE TTRQMEQEPV IVYNSKHEGI KRRVFVYRPF QNAHSDIMLK SNSFKLRNTE
KNWAPFFDTD NPKDIFLIYQ FSPLAILRCS LDTGNCELTD KSLSDEINAA TKSKMGSLRG
GSNLIEVPPA IVPKELNRKF WLGLARSTNR KTGCLKVGYR PHIVMLSKPK HKNGRFRFDY
VSSLLDFSIT PELWDPRKND FCKDGKSVLI PNSIDSWNFV KSRFEELGHD LMTITLSQAD
RYNDVIFVRG MLDHLRAVLK GDVRKMRDHF QQEKSEEQSI YLSKCSNSLS DKY
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