| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51175 |
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| Symbol | SNT2 |
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| ID | 4850881 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 319379 |
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| End bp | 324232 |
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| Gene Length | 4854 bp |
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| Protein Length | 1442 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392589 |
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| Product | hypothetical PHD type zinc finger protein with BAH domain-containing protein |
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| Protein accession | XP_001387709 |
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| Protein GI | 126273841 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5141] PHD zinc finger-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.18336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTA GACCGAAAAG GAAAGCTACC ATCAACAAGT CGTACTCCGA CACGCTTGAG
GATTATCCAA TAGAGGAGTT GTCAAAATCA TCGTCTGCAT CTTCCATAAC CTCATTGGTC
AGCAACAACA GCTCTAGAAG GAAGCCCATG AAGAGAACCT CTTCTGCCGT GGACGTAACC
AGCAGTAATG GAAATTCCAG CAGTAGTGGT AGTAGTAACA GTAATGGAGG GGGGAGGTCG
AAAGTATCAA CACCTAAGGC CAGTCTGAAA CCGCAGATGC CTCACAACTG GCAACCTCCG
GTTTCTGTCG CAGACTACTT TTCCCAGAAA CTCGATCTTA CCGACGCATA CATTGACTTG
TCAATACAGA CGCTCTATTG CCCCCGACAC GAGAATGTCC ATTTCATAAG CGACCGTAGC
AATAGTTCAA ATGGTAAGCG CAAAAATAGC AAGAAACCCT TGTTCAAATT GCAGAAGGGT
GATTATATCT ATATGGTGTC TGAGCCTCCA GGAGAGCCAT ACTATATAGC GCGAATCATG
GGATTCAAAC TTAAAGACAA AAGCCATGGC CATGATGAAC ATCTAGAGCA CGAGGAAGCA
CATCGCATAG GCAATGGCAA TTCAGCCACA GCAATCGTGG ACGCCAATGG CTACTGTTTC
CAGGTGCAAT GGTTTTACAG ACCTCGTGAT ATTTCTAAGA CGACCTCTGA CTCCAGACTC
CTCTTTGCCT CGATGCACAC AGACACATGT CCACTCCTCA GCTTTAGAGG AATAGTAACC
GTAGAACACA AACAGGATAT TGAAGATAGA TTCGGTTCTC AGAATGAGAG CCTGTCTGTA
ACCGCTACTC CCAATAAGGG CAGAAACAAG AACAATACTA AAAAGTCTAC TTCTCCTCCC
AATGTCTCGG CATTGGAGTC GTATATCCAA AACCCCAACT GTTTCTACTT CGACAAGTTG
TTTGACAGGT ACATGATAAA GTTCTACGAC ATCTTTCTGA CAAGAAACCT TCTTCAATAC
ACCACTGTAG AGAACTCCAA GAGCAAGAAC TTCTTAATTG CGTTGAACAA ACGGTTTGAG
TTCATATTTG TGGAGGGAAC AAGAGCCAAG TCGTTTGTAA ACACCTTCAG TTCTACTTCC
TGCAACTGTG AGCATTGTGG GCAATGGTGT TCTTCAACCC AAGACTCTAT CAACTGTGTA
GAGTGTGGAA AGTTCTACCA TATGCTCTGT CTAGATCCTC CTTTGTTGAA GCGGCCTAGT
AGAGGTTTCT CGTGGTCTTG CGCTGCTTGT ACCAAGAGAC ATGATATCGA GTACCACAAA
AAGAAGATGC TTATGCTTTC TCATGATAAT AAATCGTCAA ACGCTAGTCA GTTGACTAAA
GAACTCGATG CATTGAGTGT CATACCAACA AATAAAGTAG AAGATGAATC TGCTTCAACC
ACACCATCAC TGTTCCAAGA ATCTGCAATA ATTGAAGATA CTGAACTGAC CCCAGGAGGT
GAAGATGATG AAACCCAAAT CATCTTACCT AAATTCGAAA CGATGGCAAT AGACTTTTTA
CTTAACGATG CTGACTTAAC TCTTGAACAA AGACGCTTAA AGGAAGAATG GCCAATGAGA
TACTTGGGTA TGCATGCTAG ATTGGAAGAT GGAGTAGACA TCGATGACAG ATCGCCGTAC
CCTAGAGCAT CTACCAGATT GGGCGCAAAG CATCAGGCAA CAAACATACC TGAGTTCTAC
GATCATCCCA TTGAGTACTA CGATGTGGAC AAGCCTAATT CGAAAAAGGT CAAATCGAAT
GGTAAAAAGA ACAACCACGA TAATAAGGAA CCGATGGAGA AGCTTGTAGT TCCCGACGAG
TACAAGGACT TGTCGCCCAA GGAGTATCCC CAGTGGCTAC AGCCTCGTCC TAAAGGTTAT
GTAGAAAGAG GTGTAGATGA TGGCGAGGGA ATGACGTGTA CGTTACTCTG GAAGCTGTCG
GACGTTGATG TGGAGAATAA CTTCGAAAAG CTCGATTCTT ATATTCAAAG ATGCGAACCT
ATAGCCACAA GACTTAATAT GCTTCTGACT TCTCCTAACT TCATGGATTC TGTAGTTAAT
GCGTACATGA GGTATGATGG TGATGTGGAC AGAGCCTACG ATGAGATTAT GAAACTCACT
CGAAAGACTT TGAAGGAGCC TACATTCACC AAGGAAGAAG TCAAGCGATT TGAAAGTGGA
GTAAAGGAGT TTGGCAGTGA GTTGTATCCT GTCTACAAAC GTGTTAAGAC ACAGCCAAGT
GCCATGGTTG TACGGTTCTA CTATCTCTGG AAGAAAACGA AGAACGGTCG TCTCATATGG
GGTAACTTTG GTGGTAGAAT GCAGAAGAAA GTTCAGAATA TCGTAAAAGA AGAAAGTGCG
AAAACGACTG CTTCAAATTC CAAAGCACCT CCAGCCATCG ACGATTTGGC TGATCCTGAA
GATGATTCAT CGTATGAGAC GGAGAAGATT GGTTTGCACA ATAAAAAGCT CGTTTGTAAG
CATTGTCATA CGAACCAATC GTTCCAATGG TTTAGAATAA CAGGTCATTC TGCCAATCCT
AAGAAGAATG AAACCTTGGA TTTGAACTCA GAGGTCTTTG GTGATAGTGT AATTGCTCTT
TGCTTTAGAT GTGCTAAGTT GTGGAGACGC TATGCTGTTG TTTGGGAAGA CCCCAATGAA
GTAGAAAAGA AAAACACCAA GACCAGTGGC TGGAAGAAAA AAGTCGAACC AGAGCTTATT
CTGGACTCTG TCGCTATTCT TGAGGAAGCT GAAACTCAAG GGGCAACTTT GTCTTACGCC
TTTGATTACG AATCTGAAAG CAGCTTGACT GCGGCAGTCT TTGAAAGGTC GGTAACACCA
TCTGGTAAAG TAGAGCAAAA GATAATAACC AAGAAAAAGG TCAAGCCAGA GTATGTAAAT
GCTGTCAAAG AAGAGAAGGA GGAAACTAAA ACTATGAACA AAAAGAGAAA AACTTCTACA
GCAACATCCA CTACTTCTAA GAATCCCAAG ACAGCTAATG GAAAGACCTC TAAGACGGCT
TCTGCTGTAC TGAAGAGCAG ATCTAAGGAG AAGCCTGAAA CTGAAACCAA GATCAAGGCT
GAAAATGAAG GTGATGAAGC TTTGGATGAA AAACCTACTA AGGGTGTAAA GTCTCGCAAA
AGAAAGCAGG AAACCATAGA ATCTAATTTG GTAGAAAAGG AAGTTCTCAT TTCTCAGCAA
ACTACGAAGA AACAAAGAAA ACATGCTAAT TCTATGGCAA GCAAAATATT CAATCCCATT
TTCAGCGTGG ATTACAACCC TCCTGCTAGT ACTCTTACCA CCAAGATCGA CAAGAAGTTG
TATCCAAATT TGAGCAAGAA CAGTTTGGAA AACATTATTA AGAACTACAG AACCAGGCAG
TTGTTGGATT TGACATCTCA ATTACAAGTA TTGACGGTGC CTCATTTAAC ATCTGTAGAG
CTACCATTTC AAACTCATGA TAGAAAATGC TGTGTCTGTC GTGAACATGA CACAGCTGAA
AACTCCAAGC TTGAAATGCT AATCTGTTCA AACTGTGGTG TAAATATACA TAGTTCCTGT
GCTGGTATAG CAATTCCTGA GGGTGCTCAG AAACCGGTTA AGCAGTGGTT ATGTGAGCCT
TGTGTCAACG ACTTGAAGCC CTTTAACTCG ACTGTCTACT CGTGTTCGAT GTGTTTGGCA
AAGGAATCCA ATTACGAGCT TTCTATGTTG GGTTCTCCAC TTGTGAGACC AGATTTCTTA
AAGCCCATAT ATGAGTCAGG GAAATGGTGC CATCTCTTGT GTGCTATTTT CAATCACGAT
TTGATTTCTT TCCGACCTTC TACAACTACT TCGAACTCTC TGAAAAGAAT TATAAAGGAA
GATGTTTCTG ATATGAGAGC TATGGTGGAT GCTATCTATA GCGGCATCCA CATTGAAAGT
GTATCTAAGG TTTTCATTCA GAACTATCGT TCAACATGTG GCATCTGTCA GTCTCGTAAC
GGATCCATGG TCAAGTGTGA CTTGTGCGAT GATAACATCA AGTATCACCT TACATGTGCT
CAGGACACTC CAAACTTCAA GCTTGGCTTC AAGTTGGTAG CTCCTGTAAA CGAAAAAGAT
CATCAGATAG TGAAGGTGGG CAATGTGGTG GGCAAACTCA AGCCGATCTT GGTCTGTCCT
AAACACGACC AATCCACATC TACAGTGGCC AACTTGAGAA GCATTGGAAA GAGAGTATTT
GGGGTGAATA AGGATGAGCC AAAGCCTCTT ATCCAGCTAT TCTTAGAAGA TGCTGTTAAA
AACAATACCA TCAAGTTAAC TGGACCACAG TTAAGATCGA AGTCGTACAT TGAAAATTAT
AATCTCTTCA GAGGTGAATC CGAATTTAAC AGACAGAATC TGCTTTTGCT GTTGCACAAC
GAACAATCAG AAAAGATCTG TTCAGCATGT AATACCAGAA CCTCGCCAAT GTGGTGGAAC
AAAGAGAGGA CAAGTCAAGC AAAAATAGAA CAGATAGAAT CGAATGGCCC ACAGAGCAAA
GAAGTATATC TTTGTCAATC ATGTTACCAC AACAATGATG ACGATGACAG TGGAGCAAGT
AGCAGCCATA GCAATGCAGA AAATGAAACT GACGATACAG AGGAAGGCGA GAGTTTGATC
GATGTTCTCA GAAAACCTAT GTCTGCTGAG CATTACGGTA TTCGAAACGA AAAAGACCGT
CTATCTGACA TATATGTGTC GAAGTTATTG CAGGAAAAAA CTCCGGCTAA AGAAAGTAGT
AGCAGTGGAG AGACCACAAG ATCAAAGATT TCTCTTGGGG ATATCTTGAG TTAG
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| Protein sequence | MSSRPKRKAT INKSYSDTLE DYPIEELSKS SSASSITSLV SNNSSRRKPM KRTSSAVDVT
SSNGNSSSSV STPKASLKPQ MPHNWQPPVS VADYFSQKLD LTDAYIDLSI QTLYCPRHEN
VHFISDRSNS SNGKRKNSKK PLFKLQKGDY IYMVSEPPGE PYYIARIMGF KLKDKSHGHD
EHLEHEEAHR IGNGNSATAI VDANGYCFQV QWFYRPRDIS KTTSDSRLLF ASMHTDTCPL
LSFRGIVTVE HKQDIEDRFG SQNESLSNNT KKSTSPPNVS ALESYIQNPN CFYFDKLFDR
YMIKFYDIFL TRNLLQYTTV ENSKSKNFLI ALNKRFEFIF VEGTRAKSFV NTFSSTSCNC
EHCGQWCSST QDSINCVECG KFYHMLCLDP PLLKRPSRGF SWSCAACTKR HDIEYHKKKM
LMLSHDNKSS NASQLTKELD ALKSAIIEDT ELTPGGEDDE TQIILPKFET MAIDFLLNDA
DLTLEQRRLK EEWPMRYLGM HARLEDGVDI DDRSPYPRAS TRLGAKHQAT NIPEFYDHPI
EYYDVDKPNS KKVKSNGKKN NHDNKEPMEK LVVPDEYKDL SPKEYPQWLQ PRPKGYVERG
VDDGEGMTCT LLWKLSDVDV ENNFEKLDSY IQRCEPIATR LNMLLTSPNF MDSVVNAYMR
YDGDVDRAYD EIMKLTRKTL KEPTFTKEEV KRFESGVKEF GSELYPVFGD SVIALCFRCA
KLWRRYAVVW EDPNEVEKKN TKTSGWKKKV EPELILDSVA ILEEAETQGA TLSYAFDYES
ESSLTAAVFE RSVTPSGKVE QKIITKKKVK PEYVNAVKEE KEETKTMNKK RKTSTATSTT
SKNPKTANGK TSKTASAVLK SRSKEKPETE TKIKAENEGD EALDEKPTKG VKSRKRKQET
IESNLVEKEV LISQQTTKKQ RKHANSMASK IFNPIFSVDY NPPASTLTTK IDKKLYPNLS
KNSLENIIKN YRTRQLLDLT SQLQVLTVPH LTSVELPFQT HDRKCCVCRE HDTAENSKLE
MLICSNCGVN IHSSCAGIAI PEGAQKPVKQ WLCEPCVNDL KPFNSTVYSC SMCLAKESNY
ELSMLGSPLV RPDFLKPIYE SGKWCHLLCA IFNHDLISFR PSTTTSNSLK RIIKEDVSDM
RAMVDAIYSG IHIESVSKVF IQNYRSTCGI CQSRNGSMVK CDLCDDNIKY HLTCAQDTPN
FKLGFKLVAP VNEKDHQIVK VGNVVGKLKP ILVCPKHDQS TSTVANLRSI GKRVFGVNKD
EPKPLIQLFL EDAVKNNTIK LTGPQLRSKS YIENYNLFRG ESEFNRQNLL LLLHNEQSEK
ICSACNTRTS PMWWNKERTS QAKIEQIESN GPQSKEVYLC QSCYHNNDDD DKNETDDTEE
GESLIDVLRK PMSAEHYGIR NEKDRLSDIY VSKLLQEKTP AKESSSSGET TRSKISLGDI
LS
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