Gene PICST_51088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_51088 
SymbolFRE1.1 
ID4851255 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1322477 
End bp1324669 
Gene Length2193 bp 
Protein Length723 aa 
Translation table 
GC content40% 
IMG OID640392963 
ProductFerric reductase, NADH/NADPH oxidase transmembrane component (6 domains) 
Protein accessionXP_001387900 
Protein GI126274241 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.452044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA TTGCTGTATT CAACATTCTT GTCTATTTGA CTGTTATCTC TGCTCATGGT 
GCCTCTAGTT ATACAAAATA TGGTCATTTG ATAGATATTT ACACTTGTAG ATATCTGCTT
ATGCAGACTG CTTCATTTTG TAAGCCTCCG TTAGTAGGAG ATGCTTGTTT GTGCACTAAC
CCAAACGGAT TTGCTTCGAT GGTTGGATGT TTGCACCAAC TTGGTAAAAA CAGCACTTCC
AATATTGAGT TAATTGGAAA ATTATGCTTA CCATACAATA TTACAAGAAC TCCAGAAATG
TTTGAAGAAG CATATAAAAA CTTCACTAGG AATGCAAAGT CTCCGTCTCA AATAGATGGC
TACAATAGAA CGGTACCAGT GAACGTACCC GTTATATTGA ATGAGCAATT GGCTAAAATT
ACTTTGAAGT CATACACTCA CTACCTTCAC AACTTCGACT ACTCCTTGTA CTATGGAGGT
GGTATGGTTG CATACTGGGC ATTGGTTTTC ATCTTGGGAG CAGTTTGTAA CTGGTCCAAG
CTTTTATTTC CTGGGATTTT CAGAAAGATG ACAGGGCCAT TTTCCGCCTT CATTAGAAAG
TACATTACCA TGCCAGCTAC TTTCAGAAAG AGTAAGGCAC AGGAGAAGAC ATTTCTTCGT
TATTTTCAAA TTTTGATTCC ATCAAGATTG GAAACGTTGG TAATTAGTGG GTTTGTAGTA
GTTACCATTG TCTGCAACGC TATTGATATC TACTACATGG AGAACGATCC TTTATTTCCT
ACAAAGACAA GAGCAATTCT GAAATATCTT GGTGACAGAA CCGGCATTAC TGGGACTATT
TTGATTCCTC TCTTTATGTT ATTTGCTGGT CGGAATAACT TTTTGCAATG GGTCACCAGA
TGGAATTATG CAACCTTCCT TACCTACCAC AAATGGGTTG CAAGAATTGA TTTCATTTTG
ATTGTTATTC ATTCAATTAC ATACACACTT GCTCTTGATT TAAGGTATCC TTCTGAAATC
AAATTGCCAT ATCTCTACTG GGGTGTTGTT GGAACTGTTG CAGGAGGAAT ATCCTTTGTA
CAAGCTGTGC TTTACTTAAG AAGAAATTGG TATGAAATGT TCTTGTTGGT CCATATTATT
TTGGCTGTTC TCTGGATAGT AGGTGGCTGG ATTCATGTAG AAGAGTTAGG CTATATCAAC
TTCTACTATG CATCTGTTGC CGTTTGGGTA TTTGATAGAG TTGCAAGAAT AGGAAGACTC
TTGGTCTTCG GATTTCCAAA AGCACAGGTC ACTCTATTGG CCGGTGAAAC CTTGAAGGTG
GTTATTCCAA AACCTTCATA TTGGCAATCT ATTCCAGGTG GACATGCTTT CATACACTTT
CTCAGGCCAA GTTGTTTCTG GCAATCTCAT CCATTTACCT TCACGGACTC TGTTGAGAAC
AAAGACTCTA TTGTACTTTA TGCCAAGGTT AAGGGAGGTA TAACTCACAG TCTTTATCAA
TACTTGGCTG CCCACCCTGG AAAGACCACT CAAGTTAGAG TAGGTGTTGA GGGTCCATAT
GGTGAATCAA CTGCTGCGTA CAAGTACGAT TCGGCTGTTT ATGTTGCAGG GGGTAATGGA
ATTCCTGGTA TCTTCTCGGA AGCTGTCGAT TCTGCTATAA GATCCAAGGA CTCAAGGCAC
AGAGTCAAGT TGTTCTGGAT CATCAGAGAC TACAAGACTC TACTTTGGTT TCATGACGAA
TTACTTGAAT TGAAGAAAAC TAAGATTCAA ACTACCGTAA TTGTCACCAA GCCTGAATCC
CAGAGACCGG CAGAGCTAAA GAGATTATTC TCACACTCAC CTCAAGAGAA GCTTGACTTG
GTTGACGACA AGAAGGATAC CATAGACTCT GAAAATGAAA AGGTATCTGG AAGCAATTCT
GAAAGTGTCA TTTCTCTTGA ACAAGATGTC TCGAACGACG AAATTGTATC TACCATCCAA
GGAAGCTTGG GCCACATCAC CTTCAAGACT GGAAGACCTA ATATGGAAGA ACTTGTCCAA
GATGAAATCA AGGAATCCAG TGGTTCAACA GCCTTTGTCG CCTGTGGCCA CCCATTAATG
GTCGACGATA TTCGTTACGC TGTTGTCCAA AACTTGGACA ACAGTGAAAA GAAGCGGGTT
GAGTTCTTTG AGCAATTGCA AATATGGACA TGA
 
Protein sequence
MNLIAVFNIL VYLTVISAHG ASSYTKYGHL IDIYTCRYLL MQTASFCKPP LVGDACLCTN 
PNGFASMVGC LHQLGKNSTS NIELIGKLCL PYNITRTPEM FEEAYKNFTR NAKSPSQIDG
YNRTVPVNVP VILNEQLAKI TLKSYTHYLH NFDYSLYYGG GMVAYWALVF ILGAVCNWSK
LLFPGIFRKM TGPFSAFIRK YITMPATFRK SKAQEKTFLR YFQILIPSRL ETLVISGFVV
VTIVCNAIDI YYMENDPLFP TKTRAILKYL GDRTGITGTI LIPLFMLFAG RNNFLQWVTR
WNYATFLTYH KWVARIDFIL IVIHSITYTL ALDLRYPSEI KLPYLYWGVV GTVAGGISFV
QAVLYLRRNW YEMFLLVHII LAVLWIVGGW IHVEELGYIN FYYASVAVWV FDRVARIGRL
LVFGFPKAQV TLLAGETLKV VIPKPSYWQS IPGGHAFIHF LRPSCFWQSH PFTFTDSVEN
KDSIVLYAKV KGGITHSLYQ YLAAHPGKTT QVRVGVEGPY GESTAAYKYD SAVYVAGGNG
IPGIFSEAVD SAIRSKDSRH RVKLFWIIRD YKTLLWFHDE LLELKKTKIQ TTVIVTKPES
QRPAELKRLF SHSPQEKLDL VDDKKDTIDS ENEKVSGSNS ENVSNDEIVS TIQGSLGHIT
FKTGRPNMEE LVQDEIKESS GSTAFVACGH PLMVDDIRYA VVQNLDNSEK KRVEFFEQLQ
IWT