| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40259 |
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| Symbol | |
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| ID | 4851860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3032004 |
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| End bp | 3032954 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393568 |
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| Product | predicted protein |
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| Protein accession | XP_001387146 |
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| Protein GI | 126275817 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0644688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAGCA CAGATCTCGA CTTGGAAAAC ATACCCAGCA TAGACTTGCA AACTTTCACC
CATGCCTCTG TGTCCAAGCA GGGCGACAAG TACTGGTTCT TTGAGAAAAG CGAGGAATCC
TTCCCTGGAC AGACGTTTGG GTTGGAAATC TCGCGGATCT TGTACCATAC CGAGTCTCCC
TTCCAGGACA TTCTTATCTT TGAGTCCACC ACTTTTGGCA ATGTGTTGGT TCTCAACGGC
ATAGTTCAGT GCACAGAAAA GGACGAGTTT GCCTACCAGG AGTTGATAAC CCATTTGCCT
ATCATGTCCC ACCCTAGCCC CAAGAAGGTA TTGGTCATTG GGGGAGGAGA CTGTGGAGTC
ATCAGAGAAC TTGTGAAGCA TGTCGAGGAC AACACCGTCG AATCTATCAC CATGGTAGAG
ATCGATGACA TGGTGATCAA GTTGTCGACC AAATTTTTGC CCAACATGGC CAAGTACCAC
AACCACCCCA AAGTGAACTT GAGAATCGAA GACGGCTTCA AGTTCTTGAA GGAAACCACC
GAGAAGTTCG ATGTTATTAT CACCGATTCG TCGGATCCCG AAGGTCCCGC AGAGGAATTC
TTCCAGGTCA ACTACTTTAA GTTATTGTTA AACGCATTGG CCAAAAAGGG CATTGTCATC
ATGCAGAGCA GCGAGAATAT CTGGCTCAAT ATCGACTACT TGAAAGACTT GCTTGTTAAG
GCACGAATTG TGTTTAAAAA CGTTGCATAC AGTCAGTGCT ACATGCCTAG TTATACCAGT
GGACAGTTGG GTTTAGTTAT AGCTACTAAT GATGAAGAAA AGACATTGCA AACCCCATTG
AGACGGTTCC TGGAGGAGAA GGAGAGCCAG ATTTTTCAGT ATTACAGCCT GGAAATTCAT
AGTGCATCGT TTGTGTTGCC AAAATGGGCT AAGAATAAGT TGGATCTATA G
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| Protein sequence | MSSTDLDLEN IPSIDLQTFT HASVSKQGDK YWFFEKSEES FPGQTFGLEI SRILYHTESP
FQDILIFEST TFGNVLVLNG IVQCTEKDEF AYQELITHLP IMSHPSPKKV LVIGGGDCGV
IRELVKHVED NTVESITMVE IDDMVIKLST KFLPNMAKYH NHPKVNLRIE DGFKFLKETT
EKFDVIITDS SDPEGPAEEF FQVNYFKLLL NALAKKGIVI MQSSENIWLN IDYLKDLLVK
ARIVFKNVAY SQCYMPSYTS GQLGLVIATN DEEKTLQTPL RRFLEEKESQ IFQYYSLEIH
SASFVLPKWA KNKLDL
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