| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40180 |
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| Symbol | DCE1 |
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| ID | 4851810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2893445 |
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| End bp | 2895154 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393518 |
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| Product | Glutamate decarboxylase (GAD) (ERT D1) |
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| Protein accession | XP_001387119 |
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| Protein GI | 126275669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAT CTAAGCATAT TGACGCCGAA GTCCTTGAGA CGGCACTCTT GAAGAATGCT
GTCAAGCTGA AGTTGACCAA AAGAGAAGAA TACATCTCTC AGTACGACTC TGAAAAGTTG
GTGCCCAAAT ACGAAATTCC ACTGCACTCA TCTTCGGGTG AATTGGTCTA CAAATACTTG
CTGGAAGAAT TGACCTTGGA CGGCAACCCC ACGTTGAACC TTGCCTCGTT TGTAAACACT
AGCTGTGACG ACACCCAATT GAAGTTAATT ACTGACAATA TTGTCAAGAA CTTGGCCGAT
AACGACGAAT ACCCTCTGCT TATCGACTTC CAGCAAAGAT GTATTAGCAT CTTGTCCAAT
TTGTGGCATG CTCCAACCAA AGTTGACTCC ACGGGTAAAA AGGTAATCAA CTCAATTGGA
ACAGCCACAA CCGGCTCTTC TGAGGCTATT ATGTTAGCTG GGTTGGCATT GAAGAAGAGA
TGGCAGGAAA AGAGAAAGGC TGCTGGTAAG CTGACAGAAA ATCCCAACAT CATCATGGCC
AGTGTTGCCC AGGTTGCCTT GGAAAAGTTT GCCCGTTATT TCGACGTCGA GGACAGACTT
ATTCATGTCA ATGAGGAATC GGGTCACCTT ATCGATATCT CCAAAATCAA AGAAGCCGTA
GATGAAAACA CGATCGGGAT CTTTGTGATC CTTGGTTCGA CTTTCACCGG TGCGTTCGAG
CCTGTTGAGC AAATCTCACA CTTGCTTGAC GAAATTGAGA AGGAAAAGGG TCTTGATGTA
AGAATCCATG TCGATGGTGC TTCAGGTGGG TTCGTAGCTC CGTTTGTCTA TCCCCACTTA
AAGTGGGATT TCCAGATCCC CAGAGTTGAT TCCATCAACA CTTCTGGTCA CAAGTTTGGT
TTAACCACTG CTGGCTTGGG CTGGGTCATT TGGAAGGACA GCGAATTGTT GCCCAAGTCT
CTCAAGTTCT CTTTAGACTA CTTGGGAGGT GTAGAAGAGA CGTTTGGTTT GAACTTCTCC
AGAGCTGGTT TCCCAGTGGT TCTCCAGTAC TACAATTTCT TGACTTTGGG AAAAGAAGGA
TACTCTAAGA TCTTCAACTC TTGTATCTCC AATGCAAGAT TGTTGTCCAA CATCTTGGAA
AAATCTGAGT ATTTTGAAGT GTTGTCTGTC ATCCACAAGG AAGTGAGTGA CGAGAGAGCT
GCTCAAGTGT ATACCAAGGT TCACCACGTC GATAGCAAAC ATACCAAGGA AGCTATTCAC
AACGAGAAGT TTGAACCTGG TTTGCCAGTT GTAGCTTTCA GATTCTCCAA GGAATTGAGA
GAAACCTACC CTGAGATTCC CCAGGGTATT TTCTCTACCT TGTTGAGAAA CAAGGGCTAC
ATTGTTCCCA ACTACCATTT GCCTCCAGAT GAAGGAGAAA AGGAAATCTT GAGAGTGGTT
GTTCGTCAGT CGCTCAGCTT GAACCTCCTT GAGAAGTTGG TCAAGGACAG CATTGAAGCT
GTTGAGTTGT TGATCAAGTC GTGCAAGGAT GTCCGTGACG TTATCCACGC TAAACACACT
ACAGAAGAGG TGGACAAGGG TCTTGTCTAC AGCTTGTTGT TGTCCATCTC GTCCGGCGGA
GTAGAAGACA AGAAGGAAAT CCAGCACGAG CAGCTTAAGC AGGCCAGTGT CAACCCCAAG
CACAAGAGAA GGTACAGAGC TACGTGTTAG
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| Protein sequence | MTLSKHIDAE VLETALLKNA VKLKLTKREE YISQYDSEKL VPKYEIPLHS SSGELVYKYL
LEELTLDGNP TLNLASFVNT SCDDTQLKLI TDNIVKNLAD NDEYPLLIDF QQRCISILSN
LWHAPTKVDS TGKKVINSIG TATTGSSEAI MLAGLALKKR WQEKRKAAGK LTENPNIIMA
SVAQVALEKF ARYFDVEDRL IHVNEESGHL IDISKIKEAV DENTIGIFVI LGSTFTGAFE
PVEQISHLLD EIEKEKGLDV RIHVDGASGG FVAPFVYPHL KWDFQIPRVD SINTSGHKFG
LTTAGLGWVI WKDSELLPKS LKFSLDYLGG VEETFGLNFS RAGFPVVLQY YNFLTLGKEG
YSKIFNSCIS NARLLSNILE KSEYFEVLSV IHKEVSDERA AQVYTKVHHV DSKHTKEAIH
NEKFEPGLPV VAFRFSKELR ETYPEIPQGI FSTLLRNKGY IVPNYHLPPD EGEKEILRVV
VRQSLSLNLL EKLVKDSIEA VELLIKSCKD VRDVIHAKHT TEEVDKGLVY SLLLSISSGG
VEDKKEIQHE QLKQASVNPK HKRRYRATC
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