| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40173 |
|---|
| Symbol | XUT2 |
|---|
| ID | 4852047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 3499935 |
|---|
| End bp | 3501338 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | |
|---|
| GC content | 39% |
|---|
| IMG OID | 640393755 |
|---|
| Product | Sugar transporter |
|---|
| Protein accession | XP_001387242 |
|---|
| Protein GI | 126276427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATT TTCAAATCTG GAAATCAGGC AAACAAGTAA GCTACGCTGT TACATTCACT
TGTGAATTGG CATTTATTCT TTTTGGTATT GAACAGGGTA TTATTGGTAA TCTTATTAAC
AACCAGGACT TCCTAAACAC TTTTGGAAAC CCCACCGGTA GTTATTTAGG TATTATCGTT
TCTATCTATA CCTTAGGGTG TTTTTTTGGT TGTGTTATGA ACTTCTTCAT TGGTGATCGA
ATGGGCAGAA GAAGCAAAAT TGCTTCCTCA ATGACAGTTA TCACAATTGG TGTTGCTCTT
CAATGTAGTT CCTTTTCAGT TGAACAATTG ATGATTGGAA GATTTATCAC TGGGCTTGGA
ACTGGTTGGG AAACTTCTAC TTGTCCAATG TATCAGGCAG AACTTTCACC TCCAAAAGTT
AGAGGACGTT TGGTGTGCTC AGAAGCATTG TTTGTTGGAG TTGGTTTAAT CTATGCATAT
TGGTTTGATT ATGCTCTTTC TTTCACTTCT GGTCCTATTG CATGGAGACT TCCTCTTGCC
TCTCAGATTG TGTTCGCCTT TGTTGTTTTC TGTTTCACTT TCACAATACC CGAATCCCCT
AGATACATGT TTTACAAAGG AGAGAAAGAA GAAGCCAAAA GAATTTTATC TTATGTCTTT
GGAAAGCCAG GAGATCATCC TGACATTCTT AAGGAATGGA ATGATATTAA TGATGCTGTT
ATTTTGGAAA CTTCAGAAGG AGCTTTCTCG TGGGCAAAAC TTTTCAAGCC CGATAAGGCA
AGAACTGGAT ACAGAGTCTT CTTGGCATAC ATGAGCATGT TTGCGCAACA GTTGAGTGGT
GTTAATGTAG TTAATTACTA TATTACATTT GTTTTGATTA ACAGTGTTGG CATCGAAGAC
AACTTGGCCC TAATTCTTGG TGGTGTTGCC GTCATCTGTT TCACTGTTGG TTCATTAGTT
CCTACTTTCT TTGCTGATAG GATGGGAAGA AGATTGCCTT CAGCAGTTGG AGCTTTTGGC
TGTGGTGTTT GTATGATGCT AATTTCAATC TTATTAAGTT TTCAAGACAA TCCAAAGTTG
AAGAAGAGCA GTGGAGCTGG TGCTGTGGCT TTCTTTTTCG TTTTCCAACT TGTCTTCGGC
TCCACTGGTA ATTGTATTCC ATGGCTGATG ATTTCAGAGC TTATCCCCCT TCATGCACGT
GCTAAAGGAT CTTCATTAGC TACATCAAGT AACTGGCTTT GGAATTTCTT TGTTGTTGAG
ATCACTCCAA CTATCATTGA AAAGTTGAAG TGGAAAGCAT ATTTGATCTT TATGTGCTGC
AACTTCTCCT TCGTACCAAT GTTTTACTTT TTCTTTCCCG AGACAAAGAA CCTTACTTTA
GAAGCCATTG ACGATTTGTT CTCA
|
|---|
| Protein sequence | MKYFQIWKSG KQVSYAVTFT CELAFILFGI EQGIIGNLIN NQDFLNTFGN PTGSYLGIIV
SIYTLGCFFG CVMNFFIGDR MGRRSKIASS MTVITIGVAL QCSSFSVEQL MIGRFITGLG
TGWETSTCPM YQAELSPPKV RGRLVCSEAL FVGVGLIYAY WFDYALSFTS GPIAWRLPLA
SQIVFAFVVF CFTFTIPESP RYMFYKGEKE EAKRILSYVF GKPGDHPDIL KEWNDINDAV
ILETSEGAFS WAKLFKPDKA RTGYRVFLAY MSMFAQQLSG VNVVNYYITF VLINSVGIED
NLALILGGVA VICFTVGSLV PTFFADRMGR RLPSAVGAFG CGVCMMLISI LLSFQDNPKL
KKSSGAGAVA FFFVFQLVFG STGNCIPWLM ISELIPLHAR AKGSSLATSS NWLWNFFVVE
ITPTIIEKLK WKAYLIFMCC NFSFVPMFYF FFPETKNLTL EAIDDLFS
|
|---|
| |