| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40172 |
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| Symbol | SOR3 |
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| ID | 4852048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3501783 |
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| End bp | 3502928 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393756 |
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| Product | Sorbitol dehydrogenase (L-iditol 2-dehydrogenase) |
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| Protein accession | XP_001387001 |
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| Protein GI | 126276430 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.859827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCCAT CAAAAGAATC GTTGAAATTC TCCAAGGAGA ACACTTGTCT AAAGCTTACT
TCGGATCGTC AATTGGTAAT AGACAGCGAG CCAATTCCCA TCTGTGGACG AAATGAAGTA
TTGGTTCATA TCAAATGCAC TGGTATCTGT GGATCAGATA TCCATGTTTG GAAGGCAGGT
GGAATTGGAA ATTTGCAACT TAAATCAGAT TTGATTCTTG GACATGAGTG TTCTGGCGAA
ATCATTCATA TTGGAAGTGA AGTAACCGAA GACTTTGAGA TAGGTAACAA GGTGGCTATC
GAACCTCAAC TTCCTTGTGG TATATGCTTC CTTTGCACCA ACGGTAACAT GAACTTATGT
TTGAATGTTG ACTTCATGGG CATGCCTGGT ATGCCCGGAA GGCTGCCTTC CATTCATGGA
AGCATACAGA GATATAAGAC ATTGGATCCA AGGTTTGTTT ACAAACTTCC TGATAATGTG
ACTTACGAGG AAGGTGCTTT GGTAGAAGTT CTTTCTGTTG GTTATCATGG TATCCAGAAG
GCAGGTGGTT TGGAATTGGG AAAGCCTTGT GCTATTGCCG GTTGTGGTCC AATTGGTTTG
GCTACTTTGA TTCTTGCTGA AGCAGCTGGA GCTTACCCAA TAGTTGTAAC TGATGTCTCT
CAAGAGAAAT TGAACTTTGC AAAGTCATTG GTTCCTTCCG TATACACTTA CAAGGTTCAG
ACAAACTTGA GTCCAAAAGA AAGTGCAGAA AATGTTAGAA AACTCTTCGG TAAAACTGAG
TACGAAATGC CTAGTGTAGT TTTGGAATGC ACTGGTGTTG CTTCTTCTAT CAATACTTGT
GCTTACATTG TAAGAAGAAA GGGATGCTTA ACTATTTTGG GAGTTTCAGG TAGAAATGAG
ATTGATGGAT TCCCATTCAT GCAGCTTTCA TTCGGGGAAG TCGATGTGAG GTTTATCAAC
AGATACCATG ACTCATGGCC ACCTGTTATT AATTTGATCG CAAGTGGAAA GATTGATGTA
AAGAAATTTG TCACTCATAC CTTCCCTCTT GAAAAAGCTC ACGTCGCTCT TGAAACTGTC
AGCAACCCTG CTATCAGCAC AATCAAGGTT ATGGTTAAAG ATGATGAAGA TTCTCTAACC
TTGTAG
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| Protein sequence | MSPSKESLKF SKENTCLKLT SDRQLVIDSE PIPICGRNEV LVHIKCTGIC GSDIHVWKAG
GIGNLQLKSD LILGHECSGE IIHIGSEVTE DFEIGNKVAI EPQLPCGICF LCTNGNMNLC
LNVDFMGMPG MPGRLPSIHG SIQRYKTLDP RFVYKLPDNV TYEEGALVEV LSVGYHGIQK
AGGLELGKPC AIAGCGPIGL ATLILAEAAG AYPIVVTDVS QEKLNFAKSL VPSVYTYKVQ
TNLSPKESAE NVRKLFGKTE YEMPSVVLEC TGVASSINTC AYIVRRKGCL TILGVSGRNE
IDGFPFMQLS FGEVDVRFIN RYHDSWPPVI NLIASGKIDV KKFVTHTFPL EKAHVALETV
SNPAISTIKV MVKDDEDSLT L
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