| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40058 |
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| Symbol | |
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| ID | 4851672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2504577 |
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| End bp | 2505173 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393380 |
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| Product | predicted protein |
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| Protein accession | XP_001386816 |
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| Protein GI | 126275220 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0532739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTCCTC CTCCTGCTGA ACTCCGCAGA AAGTTGGTTA TTGTCGGTGA CGGTGCCTGC
GGTAAGACCT GTTTGTTGAT TGTCTTTTCC AAGGGAACGT TCCCAGAAGT TTATGTTCCC
ACAGTGTTTG AAAATTACGT TGCTGATGTT GAGATTGATG GCACTGTAGT TGAATTAGCC
CTTTGGGATA CAGCTGGCCA GGAAGATTAC GACAGATTGA GACCCTTGTC CTACCCAGAC
TCCAACGTCA TCTTGATCTG TTTCTCTGTT GATTCGCCAG ATTCGTTGGA TAACGTTTTA
GAAAAGTGGA TTTCTGAGGT GTTGCACTTC TGCCAAGGTG TCCCTATCAT TTTGGTTTGT
TGTAAGGCTG ACTTGAGAAA CGATCCTAAT GTCATTGAGC AATTGAGACA ACACCAACAA
CAACCAGTTT CGACCTCCGA GGGCCAATCA GTAGCTGAAA AGATTGGTGC CTATTCCTAC
TTGGAATGTT CTGCCAGAAC CGGCCAGGGA GTGAGAGAAG TGTTTGAAAC TGCCACTAGA
GCCTCCTTGA GCAGAAAGGA AAAGAAGACA AAGAAGAAGA AGTGTGTTGT CTTGTAA
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| Protein sequence | MVPPPAELRR KLVIVGDGAC GKTCLLIVFS KGTFPEVYVP TVFENYVADV EIDGTVVELA
LWDTAGQEDY DRLRPLSYPD SNVILICFSV DSPDSLDNVL EKWISEVLHF CQGVPIILVC
CKADLRNDPN VIEQLRQHQQ QPVSTSEGQS VAEKIGAYSY LECSARTGQG VREVFETATR
ASLSRKEKKT KKKKCVVL
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