| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39982 |
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| Symbol | |
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| ID | 4851975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3338287 |
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| End bp | 3339483 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393683 |
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| Product | predicted protein |
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| Protein accession | XP_001387208 |
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| Protein GI | 126276187 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.551295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATTT CCTCGTCGTC AAGCTTCTTC CCATTGCATA CTCTTAATGA GGACTTCTCT
GTGGAGATTC AAGACGAGTC CCGTGATCTC GAACACAGTC AGTTCAAGAT CAGATACAGA
TCGAACTCGG TAGTGTCTGG AACTTCTGAA AGCTCATTGA ACTTTGATAC TTTGCCTACT
ATCAAGGTGA TTGGTACAGG AGGAACCATT GCTTCAAAAG GGTCCTCTGC ACATCAGACT
GCCGGCTATG AAGTTGATCT TACCATTGAG GACTTGATCA AGTCCATTCC CGATATTCTG
ACCACCTGCT TGTTGGAATA CGAACAGTTG TTGAACATAG ACTCTAAGGA ATTTGGCACC
AAGGAATTGA TTCAGTTGTA CTCTAAAATA ATGCTGGAAC TCCCCAAATA CGACGGCTTT
GTCATCACCC ACGGAACCGA TACAATGGAG GAAACTGCTT TCTTCTTGCA GCTCACCATC
AACACTTACA AGCCTATAGT CATGTGTGGA TCTATGAGAC CTTCCACTGC CATTTCCTCA
GATGGGCCCA TGAACTTGTA CCAGGCTTGT GTTATCGCTG CTAGTAGAGA ATCTCGAGGC
AGAGGTGTCA TGGTAGCCCT TAACGATAGA ATTGGTTCTG GCTACTATAT CACCAAGTCC
AATGCAAACT CATTGGATAC CTTCAAATCC ATAGGTCAGG GCTACGTAGG AAACTTCGTA
GATAATGAGA TTCATTACTA TTTCCCTCCA GCAAAACCAC TCGGTATGAC ATATTTTAAC
TTGAGGCTTC CGTTGGCTGA TAACGATCTT CCACTGGTTC CAATTCTTTA TGCTCACCAG
GGCTTCAACA ACAAGATAAT AGACGTGACT GTTAAAGAAC TTGAAGCTAA GGGTCTTGTT
ATTGCTACCA TGGGAGCAGG CTCTTTGGCA GATGAAACCA ATCAGTACTT ATCCGATTTG
GTGGAGAGCA TGGAAATACC ATTTCCAATT ATCTACACCA AGCGTTCTAT GGATGGAAGG
GTACCTCTTG GATCAATCCC CAAGGTCAGA ACTGAAGATC ATACTTCACT TTCTACTTTC
GAAAGTGCTA TTCCTGGAGG CTACTTGAAT CCACAGAAGG CTAGAATCCT TTTGCAGTTG
TGTCTTTATG AGGACTACAA TATGCAAGAG ATCAAAAAGG TGTTCAAGGG TGTATGA
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| Protein sequence | MSISSSSSFF PLHTLNEDFS VEIQDESRDL EHSQFKIRYR SNSVVSGTSE SSLNFDTLPT
IKVIGTGGTI ASKGSSAHQT AGYEVDLTIE DLIKSIPDIL TTCLLEYEQL LNIDSKEFGT
KELIQLYSKI MLELPKYDGF VITHGTDTME ETAFFLQLTI NTYKPIVMCG SMRPSTAISS
DGPMNLYQAC VIAASRESRG RGVMVALNDR IGSGYYITKS NANSLDTFKS IGQGYVGNFV
DNEIHYYFPP AKPLGMTYFN LRLPLADNDL PLVPILYAHQ GFNNKIIDVT VKELEAKGLV
IATMGAGSLA DETNQYLSDL VESMEIPFPI IYTKRSMDGR VPLGSIPKVR TEDHTSLSTF
ESAIPGGYLN PQKARILLQL CLYEDYNMQE IKKVFKGV
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