| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39970 |
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| Symbol | |
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| ID | 4851820 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2914861 |
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| End bp | 2915634 |
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| Gene Length | 774 bp |
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| Protein Length | 238 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393528 |
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| Product | predicted protein |
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| Protein accession | XP_001386890 |
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| Protein GI | 126275701 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5246] Splicing factor 3a, subunit 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.891923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACT CCGGCCGAGT CAATTCCAAG AAGGGTGCTG GAGGTGTTGC TGGTGCCGAG
GAGACGAATG TACATACGCG ACAGCGGATA AAAGAGCTTC TTGCTACCCA GGTTCTAGAC
CTTGACAACG ATCCATATGT ATTTCGCAAC CATTTAGGGC TCCTCGAGTG CCGATTATGT
CTCACAACTC ATGTAAGTGA GCTGTCGTAC ATATCACATT TGGGAGGGAA GAAGCACCGT
ATGGGATTGG AGAAAAGACG GGCTTTGGAT GAGAAGTATA GTCAAAACAG ATCATTAAAC
ACCAAGATAA ATCTGATTGT ATCAATTACA AACACAGCAA AGAGATCGTG GACGAAGGTG
GGGAAACCAG CATACAAGTT GACCAAGATT CGAGATCCAG AAACGTTTCA GAAGGGACTA
CTTGTGGATA TTAAATATCC TAAGATAACT GTAGAAGAGC CTTTCTTCCG GTTCATGTCG
TACTACGAGC TCAGTACTAA GAACCAGAAT ATTTCTGTGT CTTTCATTGA TCGCGAAAAC
GGCGATGAAG GTGAGGCTAC AGATCCTAGC AATTTGCAAT ACTTGGTGAT CTCGGCTGAG
CCGTACGAGA ACATCTGTTT TATTATACCT AACGATAAAG AGATAGACAA GCCTGTGGAA
CAGGGCGAGA TGAGCAAGAG CTACTGGTGG TTCTGGGACT CTGATGCGAA GCAGTTTTTT
CTCCAGTTTT TGTACAGAGA GATAGGCGAA GGTGATAAGG AGCAAAATAA GTAA
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| Protein sequence | MDYSGRVNSK KGAGGVAGAE ETNVHTRQRI KELLATQVLD LDNDPYVFRN HLGLLECRLC
LTTHVSELSY ISHLGGKKHR MGLEKRRALD EKYSQNRSLN TKINLIVSIT NTAKRSWTKV
GKPAYKLTKI RDPETFQKGL LVDIKYPKIT VEEPFFRFMS YYELSEATDP SNLQYLVISA
EPYENICFII PNDKEIDKPV EQGEMSKSYW WFWDSDAKQF FLQFLYREIG EGDKEQNK
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