| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39722 |
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| Symbol | |
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| ID | 4851963 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3310932 |
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| End bp | 3312698 |
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| Gene Length | 1767 bp |
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| Protein Length | 571 aa |
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| Translation table | |
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| GC content | 37% |
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| IMG OID | 640393671 |
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| Product | predicted protein |
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| Protein accession | XP_001387203 |
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| Protein GI | 126276154 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.184646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA ACGTGGATTT GAAGGCCAAT TTGTTGTCTT TTCTTCCTAG AAATCCACGA
TACAAATACT CGTACAAGAC TGAGGCTGTA ATATCCGTTC TAGCAAAAGA CCAAAGCGAC
TCTATCCTAA TTACTGGTCA TAAGAATGGT CTCATAAAAT TCTGGAGGAG GTTGACTTCG
AAAGGTAAGG CAACTTCAGC AGTAATAAGT GTAGATGAAA CTGATCTGAA GGAAGAAAAT
GGTCTTGAAT GTATCAAACA ATTCACTGCC CATCTGAATA GAGAGATAGT GCAACTTCTA
GTGAACAAGG ATGGACTGAA AATGATAAGC GTAGCAAAAG ATGATCATAC TATTAAACAG
TTTGATTTGA CTACTTTGGA TATGATTCTG GTGATGAAGC TCGAGTTTCT TCCCAATACT
ATCACAACAT ATTGCAATAC ATGGTTTGAA CAAGATAATT CAGAGAGCTT ATTGATCTCA
GAACAAGGAT CTAAGAATGT CTATGTAGTA AATGTTGAAG ACGATAAAGT AGAGCAAATC
AAGAGTCCCC ACAGATCGTG TATAACTGCC ATTAAGTTCA ATGGCAGATA TACGTGTTTC
GTGTCTTCAG ATGAGAAGGG AATAGTTGAA TACTGGAAAC TCGATGGTAA TATGCCGAAG
GGTCTTACAT TTAAATACAG ATCGGAGACT AACCTTTTTG ACATTGCAAA GAACAAATCT
AAACCAATTT GCATAGCTCT TTCTTCAGAT AGAGAGAGCT TTGCTACAAT CTCACATCCA
GATAAGCAGA TACGTATATT TGACTTTAAA TCAGGAAAGA TAATTATGAA GGTTGATGAA
TCATTGAAGG TCTATGAGTC AAGGTTAAAT ACTCTTAGCA AAGAGAAATT GTTTGTCAAC
TTCAAGTTTG CAGACCCACA AGGGTCACGA AATGTTGTTT TCGACAACAA CGACAAGGTT
CTTATTTATG CATCAGTACT GGGACTTAAA ATCGTAGAAA CTCGCACAGG CAATGTATTA
TCTGTGCTTG GAGAAGACGA TCAAGATCTA ATGGATTTAA AATATAACCA AGCTTTAGTC
TTCAACAAAG TCAGTGTTGA TACCATCAGC TCGGAAATGT TGTCGTCTCT GAATTCTATT
ATTCAAGCGC AATTAAAAAG ACGACCATTG TTGATTGCAA CTAGTGAAAA TTCCGAGAGA
CTTTTTGTAT TTGACAATAC TACTTCAGAA CTTGGAGAAA GAGATGTTGA TGTGACTTCC
AAGTCGAAGA CGGACAGAAC CAGAAAAATC GATTTATTTT CGAAGGTCAC ATTACATACT
ACTCTAGGCG ATATTAAGAT CAAAGTATTT AACAAGTTTG CGCCAAAAGC GGTAAAGAAC
TTTATAACTT TATGCCAAAG AAAATACTAC GACAACATCA TATTCCACAG AGTGATAAAG
GGTTTTATGA TCCAGACAGG TGATCCTCTA GGTGACGGAA CAGGAGGTGA ATCAGCATGG
GGTTCTCATT TCGAAGACGA ATTCAATCCA AATTTAAGTC ATTCAAAGCC CTTCATGGTA
AGTATGGCGA ATGCTGGTCC AAATACAAAT GGATCTCAAT TTTTCATCAC CACAGAAAAG
ACGCCCTTTC TTGACAATAA GCATACGATA TTCGGCGAAG TTTACGTTGG ATTCGATGTT
GTCAGAAGCA TAGAGGAGAT GGAAACGGAT TCTAATGATA AGCCTTTGGA ACAGGTTGCT
ATTCTTTCTA CCACTCTTGA AAAGTAG
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| Protein sequence | MTDNVDLKAN LLSFLPRNPR YKYSYKTEAV ISVLAKDQSD SILITGHKNG LIKFWRRLTS
KENGLECIKQ FTAHLNREIV QLLVNKDGLK MISVAKDDHT IKQFDLTTLD MILVMKLEFL
PNTITTYCNT WFEQDNSESL LISEQGSKNV YVVNVEDDKV EQIKSPHRSC ITAIKFNGRY
TCFVSSDEKG IVEYWKLDGN MPKGLTFKYR SETNLFDIAK NKSKPICIAL SSDRESFATI
SHPDKQIRIF DFKSGKIIMK VDESLKVYES RLNTLSKEKL FVNFKFADPQ GSRNVVFDNN
DKVLIYASVL GLKIVETRTG NVLSVLGEDD QDLMDLKYNQ ALVFNKVSVD TISSEMLSSL
NSIIQAQLKR RPLLIATSEN SERLFVFDNT TSELGERDVD VTSKSKTDRT RKIDLFSKVT
LHTTLGDIKI KVFNKFAPKA VKNFITLCQR KYYDNIIFHR VIKGFMIQTG DPLGDGTGGE
SAWGSHFEDE FNPNLSHSKP FMVSMANAGP NTNGSQFFIT TEKTPFLDNK HTIFGEVYVG
FDVVRSIEEM ETDSNDKPLE QVAILSTTLE K
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