| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39554 |
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| Symbol | IFH2 |
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| ID | 4851793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2843959 |
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| End bp | 2845119 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640393501 |
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| Product | alpha-ketoglutarate catabolism dioxygenase |
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| Protein accession | XP_001387107 |
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| Protein GI | 126275617 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.470371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAGCC AAGGTACTCG CTTCGGTAAT TACGATATCC ATTTCTTTGA GGGACAAGAC
GAGGTAGACT CCGACGGAGT CTTGGTCATC AACAAGAGCA ACAGAGACAG ATCTAGTCAC
CCAGACTTCT TGCCTACCTG GGACCCTAAG CAAAAGTACC CACCTTTAAA GTTCTTCAAG
CACGAAGACC CAGGTAGAAG AGCTGATACC TCTTTCCCAA ACTTGTTCCC CAAGGAAGGA
GACTACTCTA TCAAGAAGGT TACTCCTAAG TTCGGTTCCC TGGTCACTGG TGTTCAATTG
TCTCAGTTAG ACTCTGCTGG TAAGGATGAA TTGGCCCTCT TGGTCGCTCA AAGAGGTGTT
GTCATCTTCA GAGAACAAGA CTTTGCCGAC AAGGGTCCAG CTTTCGCAGT TGAATACGGT
AAACACTTCG GAAGATTGCA CATCCACCCA ACATCTGGTG CTCCAAGAAA CCACCCAGAG
TTGCACATCA CCTACAGAAG ACCAGACAAG GGTGAGTTTG AAAGAGTTTT CTCCAACAGA
ACCAACAACG TTGGATGGCA CTCGGACGTT TCGTACGAAT TGCAACCACC AGGAACCACT
TTCTTCTCAG TAATTGAAGG TCCAGAATCT GGTGGTGACA CCATTTTTGC TGACACCGTC
GAAGCCTACA ACAGATTGTC GCCAGAGTTC CAAAAGAGAT TGGCCGGCTT ACATGTGTTG
CACACTTCTA AGGATCAAGC CTCTAACTCC AGAGGTCAAG GTGGAATTGA AAGAAGAAAG
CCAGTTTCAA ACATCCATCC ATTGATCAGA ACCCACCCAG TCACCGGTGA AAAGGCTATC
TTCTTGAACA AGCCCTTCGC CAGAAAGATT GTTGAATTGA AGGAAGAAGA ATCCGAGTAC
TTGCTTAAGT TCTTGTTTGA CCACATTGAA TCTTCCCACG ATTTACAATT AAGAGCCAAC
TGGGAACCAA ACTCGGTTGT TTTGTGGGAT AACAGAAGAA CTGTTCATTC AGCCATCATT
GATTGGGACA CCCCTGTTCA CAGACATGCC TTCAGAATCA CTCCACAAGC TGAAAGACCA
GTCGAAGACT TGAACGACTT GAACAAGGAA GAGTATGATG TTGGGGACTT AGAAGAAGCA
TTGAAGTCCG TTACTGCTTG A
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| Protein sequence | MASQGTRFGN YDIHFFEGQD EVDSDGVLVI NKSNRDRSSH PDFLPTWDPK QKYPPLKFFK
HEDPGRRADT SFPNLFPKEG DYSIKKVTPK FGSLVTGVQL SQLDSAGKDE LALLVAQRGV
VIFREQDFAD KGPAFAVEYG KHFGRLHIHP TSGAPRNHPE LHITYRRPDK GEFERVFSNR
TNNVGWHSDV SYELQPPGTT FFSVIEGPES GGDTIFADTV EAYNRLSPEF QKRLAGLHVL
HTSKDQASNS RGQGGIERRK PVSNIHPLIR THPVTGEKAI FLNKPFARKI VELKEEESEY
LLKFLFDHIE SSHDLQLRAN WEPNSVVLWD NRRTVHSAII DWDTPVHRHA FRITPQAERP
VEDLNDLNKE EYDVGDLEEA LKSVTA
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