| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39246 |
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| Symbol | ISW1.2 |
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| ID | 4851104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 941908 |
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| End bp | 944490 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392812 |
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| Product | ATPase component of a four subunit chromatin remodeling complex |
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| Protein accession | XP_001387415 |
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| Protein GI | 126274090 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.200885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTTG GTAAAACTCT TCAAACGATT TCGTTCTTGG GTTATCTCCG TTTTATCAAG
CACATCAACG GCCCACACAT TGTGATTACA CCAAAGTCGA CGTTGGACAA CTGGGCCAGA
GAGTTCAACC GTTGGATTCC AGATATGAAG GTGTTGGTTA TTCAAGGAGA CAAAGACCAA
AGGCAGGAAC TTCTTCGTGA GCAGGTGTTG ACGTGTAAGT TTGATGTCAT CATCGCATCG
TACGAGATAG TCATTCGGGA GAAATCTACG TTCAAAAAGT TCGACTGGGA GTACATCATC
ATCGACGAAG CCCATAGAAT CAAAAACGAA GAGTCATTAT TGTCTCAGAT TATTCGGATG
TTCCATTCGA AGAATCGTCT CTTAATTACC GGGACTCCTT TACAAAACAA CTTGCGAGAG
TTGTGGGCTC TTTTGAATTT CATTCTTCCG GATGTTTTCG CCGACAACGA GCTGTTCGAC
GAGTGGTTTC AGTCAGACGA AGACAAAAAC GATAGTGAAG ACACCGTAGT TCTGCAGTTG
CACAAGGTCT TGAAGCCCTT CTTACTCAGA AGAATTAAGG CCGATGTAGA GAAATCGTTG
TTGCCCAAAC AGGAGTTGAA TGTCTACGTC AAGATGAGCG AAATGCAGCG AAAATGGTAC
CAAAAGATTT TGGAAAAAGA CATCGATGCC GTCAACGGAG CCAACAAGAA AGAAAGCAAG
ACAAGATTGT TGAACATTGT GATGCAGTTG AGAAAGTGCT GTAACCATCC GTACTTGTTT
GAAGGGGCAG AGCCAGGACC TCCTTACACG ACTGATGAGC ATTTGGTGTA CAACTCACAA
AAGATGATAA TTTTGGACCA GTTGTTGAGG AAGTTTCAAA AAGAAGGCTC CAGAGTGTTG
ATCTTTTCAC AGATGAGCAG AATGTTGGAT ATCTTGGAAG ATTACTGTTT TTTCCGTGAG
TTCAAGTATT GTAGAATAGA TGGTCAAACT GAACATGCAG ATAGAATCAA TGCCATCGAC
GAATATAACA AGCCTGGAAG TGACAGGTTC GTGTTCTTGT TGACTACCAG AGCAGGTGGT
TTAGGTATCA ACTTGACAAG TGCTGATATT GTAGTTCTTT TCGATTCGGA TTGGAATCCA
CAGGCGGATT TACAAGCGAT GGATAGAGCT CACAGAATTG GCCAAACAAA ACAAGTCAAA
GTATTCAGAT TTGTCACAGA GAATGCCATC GAAGAGAAAG TATTGGAAAG AGCCACCCAG
AAACTTCGTT TGGACCAATT GGTTATCCAA CAAGGCAGAA ACACTGGAGG TTTGGATGGC
CAGCAAAGTT CCAAATCAGC ATCGAAGAAC GAGTTGTTAG ACATGATCCA ATATGGAGCA
GCGGACATGT TTGCATCTAG CGATTCAGCA AATGGAGAAG TGGACATTGA AGATTTGTTG
AAGCATTCTG AGAGTAAAAC AAAAGAATTG ACTGAGAAGT ACGCTCAATT GAATTTGAAT
GCATTGCAGC ATTTCACCAA TGACGAGTCA GTGTATGAAT GGAACGGAGA AAATTTCAAG
AAGAAGGAGC CCACTGCCAT AACCAACATT GGCCATGCCT GGATAAATCC TGGTAAAAGA
GAACGTAAGG AAAACTACTC TATAGACATG TACTACAAAG ACGTATTGAA CACTGGAGGT
AGAGCAGCTT CTAGTGGAGC TTCCAAGTCT GGTCCCAGAC CGCCAAAACA GTTGATTATT
TATGATCACC AATTCTATCC TGCTAAGTTG TTGGAGTTGC ATGAGTTGGA AAAGAACTAC
TATAAGAAAC AGATCAGATA CAAGGTTCCT TTGAAAGCTG GAGATTCTCT GACATTGAAA
GAACGTGAGT TAGAACAGAA GTTGGAACAG GAAGAAATCA ACAATTCTCG GGCTTTGACA
GAAGAGGAAA GAGCTTTGAA AGAAGACTTG TTAACCCAAG GTTATAGTAA TTGGAACCGA
AGAGACTTTA CGCACTTCAT TGCCGTCTGC ACGAAATATG GGCGTAATTC AATTCCGTTG
ATAGCTACGG AGTTTGAGGA TAAGTCCTTG GAAGAAGTCC GTGAATATGC AAAAGCCTTC
TGGCTGAACT ACGAGGAGAT CGAAGGCTAC GAAAGGTACA TCTCGCAGAT CGAAGCTGGA
GAGGAGAAAA TCTTGAAGAT CAAACTCCAG AAAGAAGCGT TGAGAAGAAA ATTGTCTCAG
TACAAGTATC CACTACAAGA ATTGGTATTG AAATTTCCAC CTGCCACAAC CAATAAGAGG
ATATTCAGCG ACGAAGAGGA CCGCTTTTTA CTTGTCCAAT TATACAGATA TGGATTGGAC
ACTCCTGACG TATACGAGAG AATAAAGGAA GCTATACGAG ACTCACCTTT GTTCCAGTTT
GATTTCTTTA TTCAGAGCAG AAACACTGCT GAAATCGCAA GAAGATGCCA GACATTACTT
GGATGTGTTT TGAAGGAGAT TCAACCGAAT TCTGCAAATG CCAATGGTAG TGCTACTAAA
AGAAAGAAGG AAGACACTCC TGACGTAGAC AGTAAGAAAA AGAAACAACA AAAGAAGAAG
TAG
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| Protein sequence | MGLGKTLQTI SFLGYLRFIK HINGPHIVIT PKSTLDNWAR EFNRWIPDMK VLVIQGDKDQ
RQELLREQVL TCKFDVIIAS YEIVIREKST FKKFDWEYII IDEAHRIKNE ESLLSQIIRM
FHSKNRLLIT GTPLQNNLRE LWALLNFILP DVFADNELFD EWFQSDEDKN DSEDTVVLQL
HKVLKPFLLR RIKADVEKSL LPKQELNVYV KMSEMQRKWY QKILEKDIDA VNGANKKESK
TRLLNIVMQL RKCCNHPYLF EGAEPGPPYT TDEHLVYNSQ KMIILDQLLR KFQKEGSRVL
IFSQMSRMLD ILEDYCFFRE FKYCRIDGQT EHADRINAID EYNKPGSDRF VFLLTTRAGG
LGINLTSADI VVLFDSDWNP QADLQAMDRA HRIGQTKQVK VFRFVTENAI EEKVLERATQ
KLRLDQLVIQ QGRNTGGLDG QQSSKSASKN ELLDMIQYGA ADMFASSDSA NGEVDIEDLL
KHSESKTKEL TEKYAQLNLN ALQHFTNDES VYEWNGENFK KKEPTAITNI GHAWINPGKR
ERKENYSIDM YYKDVLNTGG RAASSGASKS GPRPPKQLII YDHQFYPAKL LELHELEKNY
YKKQIRYKVP LKAGDSLTLK ERELEQKLEQ EEINNSRALT EEERALKEDL LTQGYSNWNR
RDFTHFIAVC TKYGRNSIPL IATEFEDKSL EEVREYAKAF WLNYEEIEGY ERYISQIEAG
EEKILKIKLQ KEALRRKLSQ YKYPLQELVL KFPPATTNKR IFSDEEDRFL LVQLYRYGLD
TPDVYERIKE AIRDSPLFQF DFFIQSRNTA EIARRCQTLL GCVLKEIQPN SANANGSATK
RKKEDTPDVD SKKKKQQKKK
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