Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_38818 |
Symbol | UTAF1 |
ID | 4851209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1201743 |
End bp | 1202294 |
Gene Length | 552 bp |
Protein Length | 184 aa |
Translation table | |
GC content | 41% |
IMG OID | 640392917 |
Product | Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa subunit) (U2 snRNP auxiliary factor small subunit) (U2AF23) |
Protein accession | XP_001387460 |
Protein GI | 126274195 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.019207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAGA ATGTCATTGC TCGAAACGGA GAAGACAGGC TACCATGTAC CTTTTACAAC AAGATAGGTG CTTGTAGACA CGGAGAAAAG TGTTCCAGAA AACATATACG GCCTTTGACT TCATTTACGA TACTCTTGCC CAATCTTTAC CAGAATCCCA AGTTGAACAA GAACGAAGGA GAAGAGTTGA ATCCCAAACA GCTTCAGCAG AACTTTGATC AATTTTTCAA AGATATCTTT GTCAAGTTTG CGACTTTGGG CGAGATAAAA GAGCTCGTGG TTTGTGAAAA TGAGAATAAC CATCTTAATG GAAACGTATA TGTTCGATTC AAGACTAAAC AAGAAGCTGC TGAGGCTACA TTATTGCTTA ACCAGGAATG GTTTAATGCC AGACCAGTAC ATTGTGAATT GTCACCCGTA TCTAGCTTTC CGGAAGCTAA CTGTAGAGCT TATGAAACGT CACTGTGCAC AAGGGGAGAC CATTGTAACT TTATGCATGT GCGACATCCT ACCCAGCTGT TGGTAGAGAG TCTTTTTCAA TCGCAAACCA AA
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Protein sequence | MHKNVIARNG EDRLPCTFYN KIGACRHGEK CSRKHIRPLT SFTILLPNLY QNPKLNKNEG EELNPKQLQQ NFDQFFKDIF VKFATLGEIK ELVVCENENN HLNGNVYVRF KTKQEAAEAT LLLNQEWFNA RPVHCELSPV SSFPEANCRA YETSLCTRGD HCNFMHVRHP TQLLVESLFQ SQTK
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