Gene PICST_38818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_38818 
SymbolUTAF1 
ID4851209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1201743 
End bp1202294 
Gene Length552 bp 
Protein Length184 aa 
Translation table 
GC content41% 
IMG OID640392917 
ProductSplicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa subunit) (U2 snRNP auxiliary factor small subunit) (U2AF23) 
Protein accessionXP_001387460 
Protein GI126274195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.019207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGA ATGTCATTGC TCGAAACGGA GAAGACAGGC TACCATGTAC CTTTTACAAC 
AAGATAGGTG CTTGTAGACA CGGAGAAAAG TGTTCCAGAA AACATATACG GCCTTTGACT
TCATTTACGA TACTCTTGCC CAATCTTTAC CAGAATCCCA AGTTGAACAA GAACGAAGGA
GAAGAGTTGA ATCCCAAACA GCTTCAGCAG AACTTTGATC AATTTTTCAA AGATATCTTT
GTCAAGTTTG CGACTTTGGG CGAGATAAAA GAGCTCGTGG TTTGTGAAAA TGAGAATAAC
CATCTTAATG GAAACGTATA TGTTCGATTC AAGACTAAAC AAGAAGCTGC TGAGGCTACA
TTATTGCTTA ACCAGGAATG GTTTAATGCC AGACCAGTAC ATTGTGAATT GTCACCCGTA
TCTAGCTTTC CGGAAGCTAA CTGTAGAGCT TATGAAACGT CACTGTGCAC AAGGGGAGAC
CATTGTAACT TTATGCATGT GCGACATCCT ACCCAGCTGT TGGTAGAGAG TCTTTTTCAA
TCGCAAACCA AA
 
Protein sequence
MHKNVIARNG EDRLPCTFYN KIGACRHGEK CSRKHIRPLT SFTILLPNLY QNPKLNKNEG 
EELNPKQLQQ NFDQFFKDIF VKFATLGEIK ELVVCENENN HLNGNVYVRF KTKQEAAEAT
LLLNQEWFNA RPVHCELSPV SSFPEANCRA YETSLCTRGD HCNFMHVRHP TQLLVESLFQ
SQTK