| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_38727 |
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| Symbol | SYR1 |
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| ID | 4851020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 732160 |
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| End bp | 733971 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392728 |
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| Product | arginyl-tRNA synthetase |
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| Protein accession | XP_001387368 |
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| Protein GI | 126273989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0018] Arginyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.908762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCT CCGTCCACGC TATCACCGAC GGTTTGTCCA AATTGGGCTT GCAACAGCCC
TCGGCCATTG AAGCCTCAAC TCCAGACTAC AACATCATCG ATGTCTTCAG AAACTACATC
ACCAACGAAT TGCACAGAGT CTCCGACGTT GACCAAGAGA TCATTTTCTC TGCCTTGGAC
TCTCCAAATA CTTTGGACAA GGGAGACTTG ATCGTTCCCG TTCCCAGATT GAGATTAAAG
GGTGTCAATC CAAAGGATAA GGCTGTAGAA TGGTCCGAGA AGTTCGAGAA GGGAAAGTTT
CTTTCCGAAG TTAAAGCAGA GGGCCCTTTC TTGCAATTCT TCTTCAACAA GACTTTGTTG
TACAACTTGG TTATCGGCGA TGCCTTAGCT AGAAAGACCG AATATGGTGC TTTACCTCTT
GGCTTGAACA AGAAAGTCAT TGTTGAATTC TCATCTCCCA ACATCGCTAA GCCTTTCCAT
GCTGGCCATT TGAGATCTAC CATTATCGGT GGATTCTTAT CCAACTTGTA TGAGAAAGCC
GGCTGGAACG TTACCAGAAT CAATTACTTG GGAGACTGGG GAAAACAGTT TGGTTTGTTG
GCCGTAGGCT TTGAGAGGTA CGGCTCTGAA GAGAAGTTGG CTTCGGACCC TATCAACCAC
TTGTTTGAGG TGTATGTCAA GATTAATCAA GACATCACTG CTGAAGGTGA AACCTCGCCT
ACAAATGAAG CTGCCAGACT CTACTTCAAG AAGATGGAAG ATGGTGACGA AGAAGCTTTG
AAGATCTGGA AGAGATTCAG AGAGTTGTCC ATTGAAAAGT ACATAGATAC GTATGCTCGT
CTTAACATCC ACTATGACGT CTACTCTGGT GAGTCGCAAG TTCCTAAGGA ATTAATGAAG
ATGGCCACTA AAATCTTTGA AGAAAAAGGT TTGATTCACG AAGACAGAGG AGCTAAGCTT
ATTGACTTGA CCAAGTTCAA CAAGAAATTA GGTAAAACAT TGGTCGAAAA GTCTGACGGT
ACCTCTTTGT ACCTTACCCG TGACGTTGGT GAAGCCATGA AGCGTTACAA CACCTACAAG
TTCGATAAGA TGATTTATGT GATTGCCTCG CAACAAGATT TACATTGTGC TCAATTCTTT
GAAGTGTTGA AGCAGATGGG CTTTGAATGG GTCAAGAACA TGGAACATGT TAACTTCGGT
ATGGTATTAG GTATGTCTAC CAGAAAGGGT ACGGTTGTCT TTTTGGACAA CATCTTGGAA
GAAACCAAGG AAAAGATGCA CGAAGTCATG AAGGCCAACG AGGCCAAATA TGCTCAAATC
GAAGACCCCG ACAAGATAGC CGACTTGGTT GGTATCTCGG CCGTGATGAT CCAGGACATG
CAAGCTAAGC GTATAAATAA CTACGAGTTT AAGTGGGACA GAATGACATC ATTCGAAGGT
GACACTGGTC CATACTTGCA ATATGCTCAC TCTCGTTTGA GCTCAGTGCA AAGAAAGTCT
GGCTACACTG AAGAAGACTT GGCTACTGCA AACTACGACT TGTTGGTAGA ACCATGTGCA
GCCAACTTGA TCAGAACCTT GGCTCAGTAC CCTGACACTA TCAAGAAGGC ATTGAAGACA
CACGAGCCTT CCACCATCGT CACCTACTTG TTCAACTTGA CCCATATTGT ATCTCAATGT
TATGACATCT TGTGGGTTGC TGGCCAGGAA AAGGAATTGG CCGTCGCCAG ATTGGCCTTG
TACGCCAGTG CCAAGCAGGT GTTGTACAAC GGTATGACGT TGTTGGGCTT GACTCCCGTA
GACAGAATGT GA
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| Protein sequence | MSTSVHAITD GLSKLGLQQP SAIEASTPDY NIIDVFRNYI TNELHRVSDV DQEIIFSALD
SPNTLDKGDL IVPVPRLRLK GVNPKDKAVE WSEKFEKGKF LSEVKAEGPF LQFFFNKTLL
YNLVIGDALA RKTEYGALPL GLNKKVIVEF SSPNIAKPFH AGHLRSTIIG GFLSNLYEKA
GWNVTRINYL GDWGKQFGLL AVGFERYGSE EKLASDPINH LFEVYVKINQ DITAEGETSP
TNEAARLYFK KMEDGDEEAL KIWKRFRELS IEKYIDTYAR LNIHYDVYSG ESQVPKELMK
MATKIFEEKG LIHEDRGAKL IDLTKFNKKL GKTLVEKSDG TSLYLTRDVG EAMKRYNTYK
FDKMIYVIAS QQDLHCAQFF EVLKQMGFEW VKNMEHVNFG MVLGMSTRKG TVVFLDNILE
ETKEKMHEVM KANEAKYAQI EDPDKIADLV GISAVMIQDM QAKRINNYEF KWDRMTSFEG
DTGPYLQYAH SRLSSVQRKS GYTEEDLATA NYDLLVEPCA ANLIRTLAQY PDTIKKALKT
HEPSTIVTYL FNLTHIVSQC YDILWVAGQE KELAVARLAL YASAKQVLYN GMTLLGLTPV
DRM
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