| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_38384 |
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| Symbol | TRM7 |
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| ID | 4850823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 155645 |
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| End bp | 156550 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392531 |
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| Product | tRNA methyltransferase |
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| Protein accession | XP_001387267 |
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| Protein GI | 126273581 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000191665 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAAGT CCAGTAAGGA TAAGAGAGAC ATTTACTACA GAAGAGCCAA GGAGCAGGGC
TGGAGGGCTC GTTCCGCGTT CAAATTGCTA CAGCTCCACG ATGAGTTTCA AATCTTGCAT
GGACTCAAGA GAGTCGTAGA CCTTTGTGCT GCTCCAGGCT CGTGGTCACA AGTTTTGAGT
AGAGAATTGT ACCAAAAACA GAACCAGCCA GATGCCAAAA TTGTAGCTGT GGATTTACAG
CCAATGACTC CTATAGATGG GGTTACTTGC ATTCAGGCAG ACATCACTCA CCCCAAGACT
TTGCACAAAA TATTGGATAT CTTTGGTGGA GAGCCAGCTG ATTTTGTTTG CAGTGATGGA
GCACCTGATG TGACTGGTCT CCATGATCTC GATGAGTACA TCCAGGCACA ATTAATCTTA
CTGGCTTTGC AATTAACGAC TTGTATCTTG AAACCTGGAG GAACATTCGT AGCTAAGATC
TTCCGTGGAA GAGATATAGA CTTGTTGTAC AGCCAGTTGA GCTACTTGTT TGAAAAGGTG
ATATGTGCAA AACCCCGTTC ATCAAGAGGA ACGTCTCTAG AAGCTTTCAT TGTCTGTATA
GGATATACTC CAAGACCCGG CTGGAATCCC AAGTTGGAGT TGAACAAGTC AACTGAGGAG
TTCTTCGAGG GTGCTAATAT CGGAAAAGCA ACCAATTTGC AATTTTTGGA TCTTCCAGAT
CCAGAGGAAC GTAAAATCGC CAAATTCGTA GCCTGCGGAG ATTTGAACGA TGTCGATTCA
GATGCCACCT ATTCTTTAGA TAATGAATCG AGACTTCCAG CATTGGACCC AGTGCAGATG
CCTACTGCTC CACCATATAA GAAGGCGTTG GAGATGAAGA GAAGAGGCGA TTTAGTGAGA
AGGTAA
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| Protein sequence | MGKSSKDKRD IYYRRAKEQG WRARSAFKLL QLHDEFQILH GLKRVVDLCA APGSWSQVLS
RELYQKQNQP DAKIVAVDLQ PMTPIDGVTC IQADITHPKT LHKILDIFGG EPADFVCSDG
APDVTGLHDL DEYIQAQLIL LALQLTTCIL KPGGTFVAKI FRGRDIDLLY SQLSYLFEKV
ICAKPRSSRG TSLEAFIVCI GYTPRPGWNP KLELNKSTEE FFEGANIGKA TNLQFLDLPD
PEERKIAKFV ACGDLNDVDS DATYSLDNES RLPALDPVQM PTAPPYKKAL EMKRRGDLVR
R
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