Gene PICST_38342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_38342 
SymbolISN1 
ID4851008 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp700543 
End bp701979 
Gene Length1437 bp 
Protein Length454 aa 
Translation table 
GC content44% 
IMG OID640392716 
ProductIMP 5'-nucleotidase 
Protein accessionXP_001387772 
Protein GI126273969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAA GGTATAGAGT TGAGTATGCG CTCAAGAGCC ACCGTAGAGA TGAGTTCATT 
GAGTGGATCA AGGGGCTCTT GGCTGTGCCC TTCGTACTCC ATGCCGATAT TGAGAACTAC
GATAAAGGTT TCACTGAACA TTACACGTCG TTGGAGAACT ACGATTTCTA TGTAGAGACC
CAAGAGTCTG TCATTGCAGC TGAATGTCGG AAACGTTACC TGGAGATCTT TGCAGATGTC
GAAAAGTTGG TTGACCATAC AATTTTCATG GATGAAATCA ACGAACGTAA CCCCACAAAA
GTTGCAGTGA GCAGGTTGCG TAAATTGGTG CCCTCAGTAG GTCGCTTCTT TACTGCATTA
CCATTGAAAG AGGCATTTGA CATCGAGGAT GAACGTCGAT GCATATCGAA AAGAAGACTT
GTTAGTCCTT CGTTCAACGA CGTTCGAGTC ATCTTGAATA CTGCCCAGGT TTTAGCTCTT
ACAAGAATCT ACAAAGACCA TCGCAAGATA GGTTCCAAGT TGAAGTTGGT CACTTTCGAT
GGAGATGTGA CCTTATACGA GGATGGCAAA TCGTTGACTG AAAATGATGC CGTTGTCAAG
AGGTTGATTA CGTTGTTATC TATGGACTTG TTCGTATCGG TAGTCACAGC TGCGGGATAC
CCTGGAGAGC TGGGAATTGC TAAATACTAT GAGAGATTGA AAGGATTGAT CGACGCTATC
AACAGCAAAG ACTGTATCCT CACTTCAACA CAGAAGCAGA ACTTACTTGT AATGGGTGGA
GAATCCAACT ACTTATTCCG CTACGATAAT GCAACGAAGA ACTTCAAGTT TGTAGATGCA
AAAGAATGGC ACCTCCCCAT TATGCTCAGA TGGGACAACA ACAAAATTAT TCATATCATG
CAAACCATCT ACAAGCATTT GGTTCATTTA CAGGCTCGTT TCCAGCTCCA GGAAACTACT
TCTATTGTCA GAAAGGAAAG ATCAATTGGT ATCATACCGA ACCCAGGATG CAAGATTCTT
CGTGAGCACT TGGAAGAAAT GGTTCTTTCC TGTTCCAACA AGTTGCACGA AGTGTTGGTA
TCGGCTCCAC CCAGACGTTC GTCTATTGCT CTGGAAGAAC CAGAATCACA GCATTTCCAT
GAGTCGATCA CCTGTGACGA TATCAAGGTC TGTGCCTTCA ACGGAGGATC TGATGTCTGG
GTCGATATTG GGGACAAGAG TCTTGGTGTG GAAGCCTTAC AGAAGTACTT GTGCCAAGAC
CAGACCATAA ACCACATCTG TCCCATCTTA AAGAGCGAAA GCTTACATAT TGGTGACCAG
TTCGCCAGTT TAGGTGCCAA CGATTACAAG GCTCGTTTGA GTGCTTGTAC TGTTTGGATC
GCAAACCCCA GAGAAACAGT GGCTATCTTG GATGACTTGA TTGGCCATCT TCTCTAA
 
Protein sequence
MTSRYRVEYA LKSHRRDEFI EWIKGLLAVP FVLHADIENY DKGFTEHYTS LENYDFYVET 
QESVIAAECR KRYLEIFADV EKLVDHTIFM DEINERNPTK VAVSRLRKLV PSVGRFFTAL
PLKEAFDIED ERRCISKRRL VSPSFNDVRV ILNTAQVLAL TRIYKDHRKI GSKLKLVTFD
GDVTLYEDGK SLTENDAVVK RLITLLSMDL FVSVVTAAGY PGELGIAKYY ERLKGLIDAI
NSKDCILTST QKQNLLVMGG ESNYLFRYDN ATKNFKFVDA KEWHLPIMLR WDNNKIIHIM
QTIYKHLVHL QARFQLQETT SIVRKERSIG IIPNPGCKIL REHLEEMVLS CSNKLHESIT
CDDIKVCAFN GGSDVWVDIG DKSLGVEALQ KYLCQDQTIN HICPILKSES LHIGDQFASL
GANDYKARLS ACTVWIANPR ETVAILDDLI GHLL