| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_38328 |
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| Symbol | TRS20 |
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| ID | 4851042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 792367 |
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| End bp | 792846 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640392750 |
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| Product | Transport protein particle 20 kDa subunit (TRAPP 20 kDa subunit) |
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| Protein accession | XP_001387381 |
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| Protein GI | 126274028 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5603] Subunit of TRAPP, an ER-Golgi tethering complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.387754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.265133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTCGT ACTATTTCAG CATAATAGGG ACACGCGACA ACCCGTTATA CGAAGTTGAG
TTTTCATCGT TCAAAAGCTC GTCTTCGTCT TCCTCGACAC CTCCAGGCAT ATCCCAGTTC
ACAGACTCAG TTAAAGAAAT ACTACCGTTT GTGTCCAACT CGTCTTTGGA TCTCATAGAA
GATGCTCAAT GGTCTACGAG TCAATTCAAT CTTGGTAGAA TAGACTCGTT CTACGGCCTT
CTAGTTTACG CATTTATAAC ACAGGGCAAC ATTAAGTTCA TTCTCTGTTT CGAATCGTCT
ACTACCAATA ATGGAAATGT AACCCAGAAA TACGACGAAA ACTCTATAAA GCAGTTCTTT
ATCGAGATTA ATGATTTATA TGTGAAGTGC TTGTTGAATC CATTCTATGC AGTGAACGAC
GCCATCACAT CACCGGACTT TGATCTCAAA GTCAAACTTC TAGCCAAGAA GTACCTATAG
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| Protein sequence | MSSYYFSIIG TRDNPLYEVE FSSFKSSSSS SSTPPGISQF TDSVKEILPF VSNSSLDLIE
DAQWSTSQFN LGRIDSFYGL LVYAFITQGN IKFILCFESS TTNNGNVTQK YDENSIKQFF
IEINDLYVKC LLNPFYAVND AITSPDFDLK VKLLAKKYL
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