Gene PICST_38239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_38239 
Symbol 
ID4850785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp47918 
End bp48190 
Gene Length273 bp 
Protein Length90 aa 
Translation table 
GC content40% 
IMG OID640392493 
Productpredicted protein 
Protein accessionXP_001387664 
Protein GI126273523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0401956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCG TATCGCAAAC TGCCTTGCAG AATCTCGATG ACACCTCCAG AAAGGAAATC 
ATGCAATTTG TCGAATCTGA ACAGTCTAAG TCTAAGGTTC AATTATCTAT TCACAACTTC
ACTGATATGT GCTTTAAGAA ATGTAATGCC AACAAGCCTA TAACAAGTGG CAATTTGGAC
ACCAACGAAG AGCAGTGTTT AACCAACTGC TTGAACAGAT TCTTAGATAC AAACATTAAG
GTTGTTCAGG CTTTACAAGG TACCCAGAAA TAG
 
Protein sequence
MASVSQTALQ NLDDTSRKEI MQFVESEQSK SKVQLSIHNF TDMCFKKCNA NKPITSGNLD 
TNEEQCLTNC LNRFLDTNIK VVQALQGTQK