| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_38073 |
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| Symbol | ECM31 |
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| ID | 4850984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 636399 |
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| End bp | 637337 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392692 |
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| Product | protein involved in cell wall biogenesis and architecture |
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| Protein accession | XP_001387760 |
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| Protein GI | 126273945 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.137581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.577745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCCA GAGTCCAAAT CTTCAGAAGA ACATTCAGCC TGAGTGTTTC TGCCAAATCC
TCCTACACTG GCACAGCTAG AAAGACTGTG GCCGATATCA ACAGGTTCTA TGCTAGCTCC
AAGCCAATTA CCGTCGTAAC AGCACACGAC TTCATAACCG CCAAGATGGT TGATCATGCC
GGTATCGACA TTTGTTTGAT AGGAGACTCT CTTGCCAATA CTACGTTGGG GCTTGATGAC
ACTAACGAGT TGGAGTTTCA AGAGATGCTT TATCACGTGA AGTCAGTCCA AAGAGGTAAT
GATTCGTCTT TGATCGTGGC CGATTTACCA TTTGGCTCGT ACGAGAAGTC CTCGGAACAA
GCCTTGGATA CGGCCATGAC TATTATCAAG CACGGTAAGA TTCAAGGTGT CAAGGTCGAA
GGAGGAGATG AATTCATCTT GCCAACGGTA AACCGGTTGA CCACGGTCGG AATTCCTGTA
ATGGGCCATG TTGGACTTAC TCCCCAAAAA CACAACGCTC TTGGAGGCTA CAGGCTTCAG
GGGAACTCTG TTGAAAATGC TGTCAGTATA TACAAGCAGT GTCTTGACCT CCAACGAGCT
GGTGTTTTTT CCATTGTGCT AGAGTGTATT CCCAACAAAT TGGCTCAGTA CATCACTGAA
AACTTGAGCG TTCCGACCAT TGGTATTGGT GCCGGTCCAT TTACTTCCGG GCAAGTTCTC
GTGATCTCTG ACATTCTCGG AATGAAGAGT AATAAAGAGA ACCACAAGCC CAAGTTTGTC
CGTGCCTACG AGGACTTTTA TACCAAAGGA GTTGAGGCGT TGACCAGCTA CGGTGAACAT
GTAGAGAACG CTCAATTTCC TGACGTAGAT GAGCACGGTT ACAAGATCAA GAGAGATGTA
TTTGAAGAGT TCAAGAAACA GGCCCACCAC ATCCATTAG
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| Protein sequence | MSSRVQIFRR TFSLSVSAKS SYTGTARKTV ADINRFYASS KPITVVTAHD FITAKMVDHA
GIDICLIGDS LANTTLGLDD TNELEFQEML YHVKSVQRGN DSSLIVADLP FGSYEKSSEQ
ALDTAMTIIK HGKIQGVKVE GGDEFILPTV NRLTTVGIPV MGHVGLTPQK HNALGGYRLQ
GNSVENAVSI YKQCLDLQRA GVFSIVLECI PNKLAQYITE NLSVPTIGIG AGPFTSGQVL
VISDILGMKS NKENHKPKFV RAYEDFYTKG VEALTSYGEH VENAQFPDVD EHGYKIKRDV
FEEFKKQAHH IH
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