| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37347 |
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| Symbol | SGE1.3 |
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| ID | 4851558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2131033 |
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| End bp | 2132742 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393266 |
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| Product | suppressor of gal11 null |
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| Protein accession | XP_001388034 |
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| Protein GI | 126274852 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.315077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGATA TCAAGGTACA AACGTCAAGG GTTATAGATG TAAATGATTC ACAAGTAATA
GAGAAGCAAG CCTTGGATGA CAGGCTAGGA GATGCCCATC TCAATATTCT TCCTACAAAA
AAAATCATAG TCTGTCTTGC AGCCTTATCG CTAGGTCTAT TTGCATCGTT CGCGGACCAG
ACAAGTATAA CCATAGCATT ACCAGCCATA GCCAAGGATT TAAGAGCTGA AACCACTATC
AACTGGGCGG GAACAGCCGC CTTATTGGCC AACTGTGTTT GCCAAGTTCT CTTTGGAAGA
CTAGCAGACA TCTTTGGCAG AAAGAATATT TTGCTCTTTT CTCTTGGTAC ACAAGCAGTA
GCAGACATTG GATGTGCAGT TTCTCGGACT GGGGTGGAAT TCTATATCTT TAGAGCGATT
GCTGGTATTG GATGTGGAGG TACTCAATCG TTGACCATGG TGATGTTGAG CGATATTTGT
ACCTTGAAGC AAAGGGGAAA GTATCAGGGT ATATTAGGTG CTCAGGTCGG TTTAGCGAAT
GCTTTGGGTC CCTTCATTAT GGCAGCTTTC GTAGAACACA CAACTTGGAG AGACTTCTAC
TACATGATGA TTCCCTTGGT TATAAGCGTG ATGGTTACCA TCTACTTTTT GATTGATGGT
AAGAAAAATG CTAGTCAACT CAACAACGTT TTGTCCAGAA AAGAGAAATT CAAGAAGATT
GACTACTTGG GGATGTTTTT CAGTACTGCA AGTCTTACAT TGTTGCTCAT TCCCATCAGT
GGCGGTGGTT CATCTTACCC TTGGAACAGT CCTCTCATTA TTGGTATGTT CGTATCAGGT
GGGTTGAGTT TCTTTGTTTT TATCTACATC GAATGGAAGC TTGCTGAACT TCCAATGATT
CCTTTGAGAA TTTTCGCCAG TCCCTCCCTA TCTCTTATCT TGGGTTCCAA TTTCCTATAC
GGAATGGCTT ACTACGGATT TACGTATTAC TTGCCATACT ACTTGCAAAT CGTTCGAGGA
CTCGATTCGA TCCATGCCTC GATTATTTTG TTACCATTAG TGCTTACGCA ATCTATAGCT
TCCATCATTG GAGGAACCTT GATAAGTTAT TTTGGCCACT ACAAGAATAT TATTCTTATG
GGATATGGGC TCTGGACAGT TAGCTGTGGG CTCTTGTATA TCTTCAACAC GCAGACCAAC
TGGGGAGTCA TAGTTGTCAT TTTGTTAGTT ATGGGAGTAG GCGTTGGGTG GACTTTCCAG
CCTACAATGG TTGCTGCTCA GAGTCAAGCC AAAAAATCAG ACAGAGCGAT TGTTATCAGT
GCCAGAAACG TTTTGAGATC CTTTGGTGGT TCAGTAGGCA TTTCTATTGC TTCCATGATT
GTCAGCAATA GTTTGTTAAG GGAAATCAGA AGAGAATCCA AGAATGAAGG TAGCATATTG
GACGGTTATT TGGACTACTT GAAGGATCAC ATCTACAGCA GAGTTGATAC ATCCAAGCTT
AACCACGCCC AACAAGTGGT AGTTAGAGAG ATGTACATGA AAGCCATCAA GAACTATTTC
TACATCTGCT TGCCTCTCAT TGCAGTTTGT TTTATCTCTA CCATCTTCGT GGTAGACCGA
GGCTTGCAAT GTATTGACGA GGAGCCAGAA CAAAAGAACA AGGACAAGGA ATCGGATATA
GATACAAGCA GCAACAGCTC AAGACAGTAA
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| Protein sequence | MEDIKVQTSR VIDVNDSQVI EKQALDDRLG DAHLNILPTK KIIVCLAALS LGLFASFADQ
TSITIALPAI AKDLRAETTI NWAGTAALLA NCVCQVLFGR LADIFGRKNI LLFSLGTQAV
ADIGCAVSRT GVEFYIFRAI AGIGCGGTQS LTMVMLSDIC TLKQRGKYQG ILGAQVGLAN
ALGPFIMAAF VEHTTWRDFY YMMIPLVISV MVTIYFLIDG KKNASQLNNV LSRKEKFKKI
DYLGMFFSTA SLTLLLIPIS GGGSSYPWNS PLIIGMFVSG GLSFFVFIYI EWKLAELPMI
PLRIFASPSL SLILGSNFLY GMAYYGFTYY LPYYLQIVRG LDSIHASIIL LPLVLTQSIA
SIIGGTLISY FGHYKNIILM GYGLWTVSCG LLYIFNTQTN WGVIVVILLV MGVGVGWTFQ
PTMVAAQSQA KKSDRAIVIS ARNVLRSFGG SVGISIASMI VSNSLLREIR RESKNEGSIL
DGYLDYLKDH IYSRVDTSKL NHAQQVVVRE MYMKAIKNYF YICLPLIAVC FISTIFVVDR
GLQCIDEEPE QKNKDKESDI DTSSNSSRQ
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