| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34593 |
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| Symbol | |
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| ID | 4851771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2786178 |
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| End bp | 2787020 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393479 |
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| Product | predicted protein |
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| Protein accession | XP_001386868 |
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| Protein GI | 126275552 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5074] t-SNARE complex subunit, syntaxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0614631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGA AATATCAACC AGTGGAATCA TATGAGTTGA AGAACTCTGA GGGTGACGAC
AATTTTGTCT CATTCATGGA TGAAATTCAA GATATCCGGA GTTTCTTGGA CCAATATTCC
AGTTTGATTG GCTTGATTTC CCAAAAGCAA ACTACGTTGT TACAAGAATT GGAGTATGAT
GAAGATACTG ATTTCAGCTC TAAACAGGTG GAAAGTTTGG TTACTGAGGC CCGCGCATTA
CAGTTGGATT TGAAGAATAG GATCAAGAGT GTGCAAACCG AAGCTTATCG TACGAAAGAT
CAAATAAGGT TGAGCCAGGC TGAATCAGTT AGGAACAACT TTTTGGAATT GATCCAACAA
TATCAATTGG TTGAATCAAA TAAGAGAGCT GAATCTAGAG CCCAAGCACA GAGGCAGTAC
AAGATCATTC AGCCCGATGC CACAGAGAAA GAACTACAGC AAGTGGCCGA AAACCCCGAT
AACCAACAAT ACTTCCAACA GGCACTTTTG CAATCAAACA GAAGTGAAGA GTCAACAACA
GTTTTGAAAG AAGTACAAAT TAGACATCAC GAGCTTTTGA AGTTGGAACG TACAATGGCA
GAGTTGTCGC AATTGTTTAA TGATATGGAA GAGTTGGTTA TTGAGCAAGA CGAGGCATTC
CAGAACATCG ACGAAAATGT GGGTATGGCC CAGAATGACA TTGAACAAGG TGTTGGTCAT
ACATACAAGG CCGTGGAAAG TGCCAAGAGT TATCGTAAGA AAAAGAAGTG GCTCATTATC
ATCTGCATTT TGATAGTGAT TATTATTGCA GCCGTTCTTG GGGCTTATTT TGCTACCAAG
TAG
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| Protein sequence | MSEKYQPVES YELKNSEGDD NFVSFMDEIQ DIRSFLDQYS SLIGLISQKQ TTLLQELEYD
EDTDFSSKQV ESLVTEARAL QLDLKNRIKS VQTEAYRTKD QIRLSQAESV RNNFLELIQQ
YQLVESNKRA ESRAQAQRQY KIIQPDATEK ELQQVAENPD NQQYFQQALL QSNRSEESTT
VLKEVQIRHH ELLKLERTMA ELSQLFNDME ELVIEQDEAF QNIDENVGMA QNDIEQGVGH
TYKAVESAKS YRKKKKWLII ICILIVIIIA AVLGAYFATK
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