Gene PICST_34588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34588 
SymbolADH6 
ID4851763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2770249 
End bp2771373 
Gene Length1125 bp 
Protein Length374 aa 
Translation table 
GC content48% 
IMG OID640393471 
ProductNADP-dependent alcohol dehydrogenase 
Protein accessionXP_001386863 
Protein GI126275528 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT CAAGAACTGT ACCTGAAAAA TTCTCCGGAT TCGGAGTCGA TAAGGCTGAA 
AACTGGAACA AGGCCAGACT CGTCCGGTTC GACCCTAAAC CACTTATGCC ATACGACATA
ACCATCAAGG TCATTGCCTG CGCTGTGTGC GGAAGTGACT GTCACACCGT TACTGGTAAC
TTTGGTCCTA TAAACAGAGA CGATTTGGTC GTGGGCCACG AAATCGTCGG TGAAGTCATT
GAGGTCGGCC CCGAAGTCAC CAAACACAAG CTTGGAGACG TCGTTGCCAT TGGTGCTCAA
TCTGACTCGT GCGGTGAATG CAACCGTTGT AAGAGCAACA ACGAGCAATA CTGTCAGAAG
GGCACCGTTG GTACCTACAA CTCTCTTAGC AAGAAGTGCG GTGGTTACAT TACCCAAGGT
GGATATGCCT CTCACGTCAG AGTCAACTCC CATTTCGCTG CTCGTGTTCC AGCTAACTTG
GATGTCCATC ATGCTGCTCC TTTACTCTGT GGTGGATTGA CCGTATACTC TCCAATTGTT
CGTCACGCAG GCTATGACTT GAAGGAAAAG GTCATTGGTA TTGTAGGTAT TGGAGGTTTG
GGATCCATGG CTATTCAAAT TGCCAAGGCT TTGGGTGCTA AGGAAGTGGT TGCATTCTCG
AGAAGCTCTA GTAAGAAGGA AGATGCTTTC AAGATGGGTG CATCCAAGTA CATAGCTACT
AAGGAAGACA CAGAATGGGC CAACTCCAAC TTGGACACCT TCGACATGAT CCTTAACTGT
GCCAGTTTCG GAAAGGGAGT CGACTACGAC TCGTTCATCA GAACTTTGAA GTTGGGTGGC
AAATACGTCA CTGTCTCTGC CCCTCCTGCG GATGAATCCA TCACCATTGC TCCATTCAAC
TTGCTCATTG GAGGTGGTAT CATTGCTGGG TCTGGTATTG GTTCCATGAA GGAAGCCGAC
GAATTGTTAA AGTTGTACGC CGACAACAAC TTGGCTCCAT GGATCGAAAA GGTGCCTATC
AGTGAAGAAG GTGTTCACAA GGTGATGAAC AGGATCAGTG TCGGTGACGT CAGATACAGA
TTTGTGTTGA CTGACTTCGA CCAGGCTTTT GATTCCAAGT GGTAA
 
Protein sequence
MTTSRTVPEK FSGFGVDKAE NWNKARLVRF DPKPLMPYDI TIKVIACAVC GSDCHTVTGN 
FGPINRDDLV VGHEIVGEVI EVGPEVTKHK LGDVVAIGAQ SDSCGECNRC KSNNEQYCQK
GTVGTYNSLS KKCGGYITQG GYASHVRVNS HFAARVPANL DVHHAAPLLC GGLTVYSPIV
RHAGYDLKEK VIGIVGIGGL GSMAIQIAKA LGAKEVVAFS RSSSKKEDAF KMGASKYIAT
KEDTEWANSN LDTFDMILNC ASFGKGVDYD SFIRTLKLGG KYVTVSAPPA DESITIAPFN
LLIGGGIIAG SGIGSMKEAD ELLKLYADNN LAPWIEKVPI SEEGVHKVMN RISVGDVRYR
FVLTDFDQAF DSKW