Gene PICST_34542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34542 
SymbolDAL6 
ID4851677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2512007 
End bp2513533 
Gene Length1527 bp 
Protein Length508 aa 
Translation table 
GC content43% 
IMG OID640393385 
Productallantoate permease 
Protein accessionXP_001387055 
Protein GI126275234 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCA AGGATTCTGA TATCAAGCTC GTGGCCGAAC AGATCATCCA GCTGTCTCGT 
GGGAGTGATG TTGACTTTGG AGCTGAATTT CTTTCTGAAA ACGAGAATCT CTATCCTCCA
GCAACGGAGG AGGATGAGCG CAAATTGATT AGAAAACTTG ACTTCATCTT GGTTCCAATG
CTATTCTTCA CTGCTACCAT GGGTGCAGTT GATAAAGTTG CTCAGTCAAC TGCTGCCATC
TACGACTACA GAACTGATAA CAATTTGATA GGTAACGAGT ATTCGTGGTT GGGTTCAATT
CTTTTCATTG GTTCTCTTGT AGGTATGTGG CCAATGTCAT TTCTCTTGCA AAGGTTCCCC
TTGGGCAAGG TGCTTGTCAC AGCTTCACTC TTCTGGAGTA TGTTCACCTT TCTTTTGTGT
GCTTGTGATA ATTTTGCTGG CTTGGCGACT CTTCGTTTCC TTATGGGTTT TGTAGAATGT
GCCATCGTCC CTGGCTGTAC TCTTGTCTGT GGTCGTTTCT ATACAAAGAA GGAAATCGCT
ACTCGTCTAG CTTTTGTCTT CGCCTTTGCT TCTTCTGTAA TCAACGGTTT CTTGTCTTGG
TTAGTTGGCA ACTTCAATGA CTCTCATGTT GCCGCTTGGA AGTACCTTTA CATCTTGGTT
GGATCTGTTT CATTCCTGTG GGGATGTCTC ATGTGGTTCT TTTTACCAGA CTCGCCTTTG
AATGCGAAGT TCCTATCTAC CCAGCAAAAG GTATATGTTG TGAAGCGTGT CATCCGAGAT
AGTAATGGTG GAGTTGACTC CAACCATTGG AACTGGAACC AGGTAAAAGA AGCATTTTGT
GACTACAAAG CTTACACTGT TTTCTTTTTC AACATCAGCA TCAATATTTG TAATGGTGGT
CTTTCAACTT TCTCGGCTAT CATCATCAAT AACCTTGGTT TCGATGCAAT GAAATCGTCA
TTGATGGGTA TTCCTACCGG TGTCATCGCC ACGATCGCTA CTATCTTTTT CACTTATTTA
TGTAACAAGT TTAGCAATCG ACGCAGTTTG ATCGCTATCA TTTCACTTAT ACCTCCATTG
GCTGGATCAG CTATTCTTTA CGGCGTTGAT CGTCTGAAAG TTGCCCCACA GTTAGTCGGA
CTCTATTTGC TTTATTTCTA CTTTGCACCA TATGTCGTTA TGATGTCGCT TGCGCAAGCC
AACACTGCTG GTAACACCAA GAAGTCAGTG ACTTATTCGA TGAACTATTT GGGCTACTGT
GTTGGGGCAC TCATTGGGCC TCAAACCTTC AGAGCAAATC AGGCTCCAAA ATACACTGGT
GGTTTCATTG CTTTGCTTTG CTCATTTCTT ATTTGTATGA TGTTTGCTGG ATTCTACTGG
TTGATTTGTA TCTGGGAGAA TAACAAGAAG GACAAGTTGG TCACTGGTAG TGACGGGGAA
CTGGAGGTGA ACCTGCTGAC TGAGGAGGGG GAGGAGTTTT ATGACCTTTC TGATTTGAAG
AGAAAGAACT TTCGTTACAC TACCTAA
 
Protein sequence
MNFKDSDIKL VAEQIIQLSR GSDVDFGAEF LSENENLYPP ATEEDERKLI RKLDFILVPM 
LFFTATMGAV DKVAQSTAAI YDYRTDNNLI GNEYSWLGSI LFIGSLVGMW PMSFLLQRFP
LGKVLVTASL FWSMFTFLLC ACDNFAGLAT LRFLMGFVEC AIVPGCTLVC GRFYTKKEIA
TRLAFVFAFA SSVINGFLSW LVGNFNDSHV AAWKYLYILV GSVSFLWGCL MWFFLPDSPL
NAKFLSTQQK VYVVKRVIRD SNGGVDSNHW NWNQVKEAFC DYKAYTVFFF NISINICNGG
LSTFSAIIIN NLGFDAMKSS LMGIPTGVIA TIATIFFTYL CNKFSNRRSL IAIISLIPPL
AGSAILYGVD RLKVAPQLVG LYLLYFYFAP YVVMMSLAQA NTAGNTKKSV TYSMNYLGYC
VGALIGPQTF RANQAPKYTG GFIALLCSFL ICMMFAGFYW LICIWENNKK DKLVTGSDGE
LEVNLLTEEG EEFYDLSDLK RKNFRYTT