| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34288 |
|---|
| Symbol | YK54 |
|---|
| ID | 4851260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 1335310 |
|---|
| End bp | 1335753 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 640392968 |
|---|
| Product | Uncharacterized conserved protein Function unknown |
|---|
| Protein accession | XP_001387904 |
|---|
| Protein GI | 126274246 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.255013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACTG AAATAACCGT CGAGGAACCC TTGACTTCCA ACGTCCGTCC TGCCACGGAC
GCTTTGATAA CCGTAAGAAT CATCAAGTCT TTCCTCTACA GAAATGTCAA AAACCACATT
GTGCATTCCA TCAATTTAAA GGAAACCACA GCCAGCCAGT TGTTGGACCT CGTAAAATCC
GCCATCAATA CCATGGGTGC CTACAGACCC TACAGAAACA TCGAGTACGA CTCTCTCAAG
ATATACACCA AGGCTCATGG CTCCAAGTCC ATGAACTTGG TCATAAACTT TGAAAACGAC
CAGGGCTGGG TCCTCATCTC TCCTCTGGTA ACTGCTACCG AAACCTCGTT ATGGGACTTG
GGCGTAGAGA ACGAAACTGA GATCAGTTTA TTTAACTGGA ACGACTACGT AGCATTCAAG
GCTAATCCAG AAGAAAAGTG GTGA
|
|---|
| Protein sequence | MSTEITVEEP LTSNVRPATD ALITVRIIKS FLYRNVKNHI VHSINLKETT ASQLLDLVKS
AINTMGAYRP YRNIEYDSLK IYTKAHGSKS MNLVINFEND QGWVLISPLV TATETSLWDL
GVENETEISL FNWNDYVAFK ANPEEKW
|
|---|
| |