Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34151 |
Symbol | SOD3.2 |
ID | 4851021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 734681 |
End bp | 735364 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | |
GC content | 49% |
IMG OID | 640392729 |
Product | manganese-superoxide dismutase |
Protein accession | XP_001387369 |
Protein GI | 126273994 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.096588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCTA CCGTCAAGAC CTCTGCTCGT TCTTTGAGAA ATGCCCGTTC CGTAGCCTCT GTTATTGGAG CTGTGAGAAC TAAGGTATCG TTGCCCGATT TGGATTGGGA CTACGGAGCC TTGGAGCCTC ACATTTCCGG TCAGATTAAC GAACTCCACT ACACCAAACA CCACCAGACT TATGTCAACG GCTACAACCA GGCCATTGAG CAACACGCCG AAGCCAAAGC TAAGGGCGAA GTTAAGAAAA CCGTTGAATT ACAAAAGGCT ATCAACTTCC ATGGTGGAGG CTACACCAAC CACTGCTTGT TCTGGAAGAA CTTGGCTCCT GAAAAGCAGG GAGGAGGTGT ACCTCCTGCT GATGAGTCTG ACTTTGCCAA GAGAATTGCC TTACAGTACG GATCTCTTGA CAACTTGAAG GCTGTCACCA ATGCCAAGTT GGCCGGTATC CAGGGCTCGG GTTGGGCTTT CATCGTAAAG AACAAGGAAA ACGGTGGTGC TTTGGATGTC GTCACCACTG CTAACCAGGA CACTGTACTT GGTCCATTGG TGCCATTGGT CGCCATTGAT GCTTGGGAAC ATGCCTACTA CTTGCAGTAC CAGAACGTCA AGGTCGATTA CTTCAAGGCC ATCTGGAACG TTATTAACTG GAAGGAAGCC GAGAAGAGAT ACTTGGTTAA TTAG
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Protein sequence | MLSTVKTSAR SLRNARSVAS VIGAVRTKVS LPDLDWDYGA LEPHISGQIN ELHYTKHHQT YVNGYNQAIE QHAEAKAKGE VKKTVELQKA INFHGGGYTN HCLFWKNLAP EKQGGGVPPA DESDFAKRIA LQYGSLDNLK AVTNAKLAGI QGSGWAFIVK NKENGGALDV VTTANQDTVL GPLVPLVAID AWEHAYYLQY QNVKVDYFKA IWNVINWKEA EKRYLVN
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