Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34123 |
Symbol | BGL5 |
ID | 4850980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 623361 |
End bp | 625892 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | |
GC content | 45% |
IMG OID | 640392688 |
Product | beta-glucosidase |
Protein accession | XP_001387350 |
Protein GI | 126273941 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0475476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTTC AAGAATTAGA TGTCGAACGT TTGATCGAGG AATTGACTAT TCCTGAAAAG ATCTCCTTGT TGGCCGGTAA GGACTTCTGG CACACTGTTC CGATCGAGAG ATTGAACATT CCTTCAATCA GAGTCTCGGA CGGTCCTAAC GGTATCAGAG GTACCAAGTT CTTCAACTCG GTTCCTTCCA ACTGTTTCCC ATGTGGTACC GGTTTGGCTG CTACCTTCAA CAAGGACTTG TGGGTTGAAG CTGGTGAGTT GATGGGTAAG GAAGCCAAGA TGAAGGGTGC CCATGTGATC TTAGGTCCTA CCTCGAACAT CGTTCGTTCT CCATTGGGAG GAAGAGCCTT CGAATCGTAC TCCGAGGACC CACTTTTGTC TGGACACGCT GCCGCAAACA TCATCAAGGG TATTCAAAAC GAAAATGTCG TTGCATGTCT TAAGCACTTT GTCTGTAATG ATCAAGAAGA CGACAGAAGA GGTGTCGACA CCTTGTTGAC CACCAGAGCT TTCAGAGAAA TCTACTTGAA GCCTTTCCAC ATTGCTTTAA GAGACGCTGA CCCTGGTGCC TTGATGACTG CTTACAACAA GATCAACGGT ATCCATGTTT CGGAATCCAA GGAAATCTTG CAGGGAATCT TGAGAGACGA GTATAAGTAC GAAGGTGCTA CAATGTCCGA CTGGTTCGGA ATCTACTCTA CCAAGACTGC TTTGGAAGCC GGTTTGAACT TGGAAATGCC TGGTCCAACC AGATTCAGAT TGCCAATCCA AACTCTCCAT GAAGTTCAAG CTAACAGAAT CCACACCAAG ACCATTGACG ATAACGTTCG TTACGTCTTG AAGTTGATCA ACAGAGCTTT GAAAGCCGAT ATTCCTCATG ATGTTGTTGA GTCTGCCAAC GAGGACCCTG CTGCTTCTGA AATCTTGAGA AAGGTGGGTG ATGAGTCTAT CGTTTTGTTG AAGAACGAAG GCAACATCTT GCCTTTGTCC AAGACTTCTG TTGCTGGTCA AGAAAAGATC GCTGTCATTG GTCCAAACGC CAAGGCTGCT CAAGACTCTG GTGGTGGATC TGCTTCTCTT ACTGCTCGTT ACAAGGTTAC CCCATGGGAA GGTATCAAGA AGAAGATCGA GGAAGGTGGA AACACTGTTT CTTTGGAATA TTCCTTGGGT GCTTTCTTAG ATAAGAACTT GCCAGATGTT GCAGACATCT TAGAAAACGA AAAAGGTGAA AAGGGTGTCA CTGCTAAGTT CTTCAAGAAT GCTCCAGGCA CCAAGGACAG ACAACAGTTT GCTGAATACT TGCTTCCAAC CTCTAAACTC TTCCTTTCTG ACTTCACTGA CCCAGGTTTG GAATTAGGCG AATTGTTGTT CTACGCTGAT TTCGAAGGTT ACTTCACTCC AGAGGAAACT GCTGACTACG ACTTCGGAGC TTCTTGTTTG GGTACTGCTC AAGTCTTTGT TGACGGTAAG TTGGTTGCTG ACAACAAGAC CAAGCAAACA AAGGGTGATG CCTTCTTCTT AGGTTTAGGT ACCAGAGAAG AAAGAGGTAC TGTCCATTTG GAAAAGGGTA AGAAGTACCA TGTTAAGTGT GAGTTTGGTA CCAGTCCCAC CTACACTTTG GAAGCATCTC AAGAAATCGG TGGTGTCTTC TTCGGTTTCA GAATCAACTC TCCAGCTGAA ATCGAAATCA CCAAGGCTGT TGAACTCGCC AAGTCTGTTG ACAAGGTCGT CTTGGTTGTT GGTCTCTCCA AAGAATGGGA ATCTGAAGGT TTCGACAGAC CAGACATGGA CATTCCAGGT GCCACTAACC AGTTGATTGA AGAAGTCTTG AAGGTCAACA AGAATGTCGT CGTCGTTAAC CAATCTGGTT CTCCAGTGAC TATGCCATGG GTTGACCAAG TTCCAGCTTT GGTCCACGCT TGGTATGGTG GTAACGAATT GGGTAACACC ATTGCTGATG TATTGTTTGG TGATGTCAAC CCATCTGGTA AGTTGTCTAT GTCTTTCCCA AAGAAGCTTG AAGACAACCC ATCTTACCTT AACTTCGGTT CCATCAACGG TCAGGTCTGG TATGGTGAAG ACATCTTTGT AGGATATAGA TACTACGAGA AGGTCAAGAA GGATGTCTTA TTCCCATTCG GTTTCGGTTT ATCCTACACC ACTTTCGACT TCAAGGACTT GTCTGTTGCA GCCGATGACG AAAACGTTAC TGTTAGCGTC AAGGTCACCA ACACCGGTTC TGTAGATGGT TCTGAGACAG TTCAAGTCTA CATTGAACAA TCCAACCCAA GCATCATTAG ACCCGTTAAG GAATTGAAGG ATTTCGGTAA GGTCTTCTTG AAGGCTGGTG AAACAAAATC TGTTGAAGTC AAGATCTCCA TCAAGGAAGC TACCTCCTAC TGGAATGGCT ACCAAGACAA GTGGCAGTCA GAAAAAGATA CCTACAAGGT ATTGGTTGGT AACAGTTCGG ACAACATCAT TCTTGAGGGT AAATTTGCTA CCTCCAAGAC TTTCTACTGG TTGGGATTAT AG
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Protein sequence | MGVQELDVER LIEELTIPEK ISLLAGKDFW HTVPIERLNI PSIRVSDGPN GIRGTKFFNS VPSNCFPCGT GLAATFNKDL WVEAGELMGK EAKMKGAHVI LGPTSNIVRS PLGGRAFESY SEDPLLSGHA AANIIKGIQN ENVVACLKHF VCNDQEDDRR GVDTLLTTRA FREIYLKPFH IALRDADPGA LMTAYNKING IHVSESKEIL QGILRDEYKY EGATMSDWFG IYSTKTALEA GLNLEMPGPT RFRLPIQTLH EVQANRIHTK TIDDNVRYVL KLINRALKAD IPHDVVESAN EDPAASEILR KVGDESIVLL KNEGNILPLS KTSVAGQEKI AVIGPNAKAA QDSGGGSASL TARYKVTPWE GIKKKIEEGG NTVSLEYSLG AFLDKNLPDV ADILENEKGE KGVTAKFFKN APGTKDRQQF AEYLLPTSKL FLSDFTDPGL ELGELLFYAD FEGYFTPEET ADYDFGASCL GTAQVFVDGK LVADNKTKQT KGDAFFLGLG TREERGTVHL EKGKKYHVKC EFGTSPTYTL EASQEIGGVF FGFRINSPAE IEITKAVELA KSVDKVVLVV GLSKEWESEG FDRPDMDIPG ATNQLIEEVL KVNKNVVVVN QSGSPVTMPW VDQVPALVHA WYGGNELGNT IADVLFGDVN PSGKLSMSFP KKLEDNPSYL NFGSINGQVW YGEDIFVGYR YYEKVKKDVL FPFGFGLSYT TFDFKDLSVA ADDENVTVSV KVTNTGSVDG SETVQVYIEQ SNPSIIRPVK ELKDFGKVFL KAGETKSVEV KISIKEATSY WNGYQDKWQS EKDTYKVLVG NSSDNIILEG KFATSKTFYW LGL
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