Gene PICST_34027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34027 
SymbolDAL5 
ID4850844 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp209035 
End bp210654 
Gene Length1620 bp 
Protein Length508 aa 
Translation table 
GC content41% 
IMG OID640392552 
Productallantoate permease 
Protein accessionXP_001387278 
Protein GI126273677 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA AAGAAAAGAA TACAGTGGTG ACAGAATTGC ACTCATTGGT AGAATTGAGC 
CACGACGAAC ATGATGTGAA GGCTGCAACA ACCCATCGCA GTACCATTAG ACACGAAATT
ACTTCTGAGA AGGAATTGGA CGACGCTTAC CTTTATACTA CTGTTCATGA GCATGTCGAG
CTTGACGAAG CAACAGACAG AAAGTTGTTG CGTAAAATCG ATTTCTTCCT TATGCCAGTA
TTATGTACTC TTTACTGTTT CCAGTTCATG GACAAGTTGA CCAACTCCTA TGCTTCTATT
CTTGGTTTAC GTACTGATTT ACATATGGTA GGAGACATGT ACTCGTGGAC CGGGTCTGCC
TTCTATCTTG GGTACCTTGT GTTTGAGTTT CCTGCTGTGG CACTTTTGCA GAGATTCCCC
GTTGCTAAAA CTGTTGGAAT ATTCATTATC TTGTGGGGTG TCGTCTTATG TCTTCATTCT
ATTGCAAATT ATGCTGGGTT CATTGTCCTT AGAACAATTC TTGGAATGCT CGAAAGTTCT
GTGACCCCAG GGTTGGTGAT TATTACCTCT CAATATTACC GTGGGGCAAG TCACCGTATC
CGTGGACAAG AAGATAAGAA GCAATTTTCA GACGAAGTAT TCCTCAGAAC TGCGTGGTGG
TTTGCCAGTA ATGGAATTGG CGCTATCATT GGGTCGGGAG CCATTGCTTT CAATATTTTC
AATAATGCTG GCAATTATTC ATTGAAAGCA TGGAAGTTGA TCTTTATTGT AACAGGGGTT
TGCACGATTT TTATTGGAGT CATTTTCTTT ATCCACATTC CAGATAATCC CACTAAGGCC
TGGTTTCTTT CAGAAAGAGA AAAGATTTTG GTGGTTGAGA GAATCAGAGT AAACCAACAG
GGTTTTGGTA ACAAGAAGTT CAAGTTGTAT CAATTCAAGG AAGCTCTTCT TGACCATAGA
ACATGGCTAT TCTTCTTTAC TGCTCTCTTC AGTAATATCC CCAATGGTGG CTTGACCAAC
TTTGCTTCCA TATTGTTGTC AGAGGACATG GGATTCTCTA CGGGAAAAGC ATTATTGATG
CAAATGCCAG GTGGAGCAGT GGAAATAGCC GGTTGTGTCC TTTTGGCATA CTGTTCCAAT
TTTTTGAAAT CCAGGATGTT TTGGGCTGTT TTAGGTAGTG GAATTGCAAC AATTGCCATG
TTTTTATTGG CATTTTCCAA TGATGATACC ACTAAATATG CCGGCTATAC AACCACCCTT
ATTGCTCCTA TCGGGTTAAT TTCCTTGTTG TCCAATATTT CCAGTAACGT CACTGGCCAT
ACCAAGAAGG TGACAGTTAA TGCAATTTTG TTAATTGGAT ACTGTGTCGG AAACCTCATA
GGTCCTCAAA CATTTTTGGC TACTGAAGCT CCAAATTTCA GGACCGCAAA GATCTGTATA
GCTGTGTTTG CAATGCTTTC ATTCATTTGC TTCAACCTTA TTTGGATCTC ATACTATCTT
CTGAACAAGA AAAAGGATAG AGAGTATGAG GAGGCCGGTG GCGAATTTGA TTTGGGAGAG
AACTATGAGT TCACAGATTT GACAGACAAG GAGAACCCCC TCTTTAGATA CAAATTGTAG
 
Protein sequence
MSDKEKNTVV TELHSLVELS HDEHDVKAAT THRSTIRHEI TSEKELDDAY LYTTLLRKID 
FFLMPVLCTL YCFQFMDKLT NSYASILGLR TDLHMVGDMY SWTGSAFYLG YLVFEFPAVA
LLQRFPVAKT VGIFIILWGV VLCLHSIANY AGFIVLRTIL GMLESSVTPG LVIITSQYYH
EVFLRTAWWF ASNGIGAIIG SGAIAFNIFN NAGNYSLKAW KLIFIVTGVC TIFIGVIFFI
HIPDNPTKAW FLSEREKILV VERIRVNQQG FGNKKFKLYQ FKEALLDHRT WLFFFTALFS
NIPNGGLTNF ASILLSEDMG FSTGKALLMQ MPGGAVEIAG CVLLAYCSNF LKSRMFWAVL
GSGIATIAMF LLAFSNDDTT KYAGYTTTLI APIGLISLLS NISSNVTGHT KKVTVNAILL
IGYCVGNLIG PQTFLATEAP NFRTAKICIA VFAMLSFICF NLIWISYYLL NKKKDREYEE
AGGEFDLGEN YEFTDLTDKE NPLFRYKL