Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34027 |
Symbol | DAL5 |
ID | 4850844 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 209035 |
End bp | 210654 |
Gene Length | 1620 bp |
Protein Length | 508 aa |
Translation table | |
GC content | 41% |
IMG OID | 640392552 |
Product | allantoate permease |
Protein accession | XP_001387278 |
Protein GI | 126273677 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACA AAGAAAAGAA TACAGTGGTG ACAGAATTGC ACTCATTGGT AGAATTGAGC CACGACGAAC ATGATGTGAA GGCTGCAACA ACCCATCGCA GTACCATTAG ACACGAAATT ACTTCTGAGA AGGAATTGGA CGACGCTTAC CTTTATACTA CTGTTCATGA GCATGTCGAG CTTGACGAAG CAACAGACAG AAAGTTGTTG CGTAAAATCG ATTTCTTCCT TATGCCAGTA TTATGTACTC TTTACTGTTT CCAGTTCATG GACAAGTTGA CCAACTCCTA TGCTTCTATT CTTGGTTTAC GTACTGATTT ACATATGGTA GGAGACATGT ACTCGTGGAC CGGGTCTGCC TTCTATCTTG GGTACCTTGT GTTTGAGTTT CCTGCTGTGG CACTTTTGCA GAGATTCCCC GTTGCTAAAA CTGTTGGAAT ATTCATTATC TTGTGGGGTG TCGTCTTATG TCTTCATTCT ATTGCAAATT ATGCTGGGTT CATTGTCCTT AGAACAATTC TTGGAATGCT CGAAAGTTCT GTGACCCCAG GGTTGGTGAT TATTACCTCT CAATATTACC GTGGGGCAAG TCACCGTATC CGTGGACAAG AAGATAAGAA GCAATTTTCA GACGAAGTAT TCCTCAGAAC TGCGTGGTGG TTTGCCAGTA ATGGAATTGG CGCTATCATT GGGTCGGGAG CCATTGCTTT CAATATTTTC AATAATGCTG GCAATTATTC ATTGAAAGCA TGGAAGTTGA TCTTTATTGT AACAGGGGTT TGCACGATTT TTATTGGAGT CATTTTCTTT ATCCACATTC CAGATAATCC CACTAAGGCC TGGTTTCTTT CAGAAAGAGA AAAGATTTTG GTGGTTGAGA GAATCAGAGT AAACCAACAG GGTTTTGGTA ACAAGAAGTT CAAGTTGTAT CAATTCAAGG AAGCTCTTCT TGACCATAGA ACATGGCTAT TCTTCTTTAC TGCTCTCTTC AGTAATATCC CCAATGGTGG CTTGACCAAC TTTGCTTCCA TATTGTTGTC AGAGGACATG GGATTCTCTA CGGGAAAAGC ATTATTGATG CAAATGCCAG GTGGAGCAGT GGAAATAGCC GGTTGTGTCC TTTTGGCATA CTGTTCCAAT TTTTTGAAAT CCAGGATGTT TTGGGCTGTT TTAGGTAGTG GAATTGCAAC AATTGCCATG TTTTTATTGG CATTTTCCAA TGATGATACC ACTAAATATG CCGGCTATAC AACCACCCTT ATTGCTCCTA TCGGGTTAAT TTCCTTGTTG TCCAATATTT CCAGTAACGT CACTGGCCAT ACCAAGAAGG TGACAGTTAA TGCAATTTTG TTAATTGGAT ACTGTGTCGG AAACCTCATA GGTCCTCAAA CATTTTTGGC TACTGAAGCT CCAAATTTCA GGACCGCAAA GATCTGTATA GCTGTGTTTG CAATGCTTTC ATTCATTTGC TTCAACCTTA TTTGGATCTC ATACTATCTT CTGAACAAGA AAAAGGATAG AGAGTATGAG GAGGCCGGTG GCGAATTTGA TTTGGGAGAG AACTATGAGT TCACAGATTT GACAGACAAG GAGAACCCCC TCTTTAGATA CAAATTGTAG
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Protein sequence | MSDKEKNTVV TELHSLVELS HDEHDVKAAT THRSTIRHEI TSEKELDDAY LYTTLLRKID FFLMPVLCTL YCFQFMDKLT NSYASILGLR TDLHMVGDMY SWTGSAFYLG YLVFEFPAVA LLQRFPVAKT VGIFIILWGV VLCLHSIANY AGFIVLRTIL GMLESSVTPG LVIITSQYYH EVFLRTAWWF ASNGIGAIIG SGAIAFNIFN NAGNYSLKAW KLIFIVTGVC TIFIGVIFFI HIPDNPTKAW FLSEREKILV VERIRVNQQG FGNKKFKLYQ FKEALLDHRT WLFFFTALFS NIPNGGLTNF ASILLSEDMG FSTGKALLMQ MPGGAVEIAG CVLLAYCSNF LKSRMFWAVL GSGIATIAMF LLAFSNDDTT KYAGYTTTLI APIGLISLLS NISSNVTGHT KKVTVNAILL IGYCVGNLIG PQTFLATEAP NFRTAKICIA VFAMLSFICF NLIWISYYLL NKKKDREYEE AGGEFDLGEN YEFTDLTDKE NPLFRYKL
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