Gene PICST_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_3255 
SymbolHYR6.1 
ID4852045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3492066 
End bp3493256 
Gene Length1191 bp 
Protein Length397 aa 
Translation table 
GC content40% 
IMG OID640393753 
Producthyphally regulated cell wall protein 
Protein accessionXP_001387240 
Protein GI126276418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTC GAAAATACAT TCTTGCAGTG CTTACCTTGA TAACTAGCGT GATGGCTAGA 
ACTATCACTA CAAATACTAT AGATCGTGGG GCTATCTCTC TTGGACTTGG GGATACAATC
ATTGAAGATG GCGTCTATTG GTCAATCATC GATAACCTAG CTACCGCATT TGCAGGTAAT
GTTGATGTCG GTTCTGGCTC TGGATTATAT ATCAGCGGTC TCAATCCTTT ACTTTCTATG
CTGGTAACTC TTTTGCTGGG TTCTCTTACT AATGACGGTA TTATATCTCT AAATGCGGTC
CAATCTTTAC TCGCTCCAAC ATACAGTCTT GTCGGTATCT CGTTCACCAA TAATGGTGAA
ATGTACTTAG GCGCAGACGG TTCATTCGGT TCACCTAATA TCCAGATTAC CGCCCCAATA
TGGAACAATA ACGGTTTGTT GGTTTTCTAT CAAAAAACAA GATCTTCAGC AAGTATAGAA
TTGGGTACAT CGGGTCTTGA CATAAAAAAT AACGGCCAGA TTTGTTTTTT CAATGAATTG
TACACTCAGA GAACGAATAT TGTAGGGACT GGTTGCATTA CTTTAGATGA AAACTCCAGT
ATTTTCTTAT CGAATACCCT TTTGAATATT GACACCAATC AGGTCTTTTA TTTGGCAGAT
TCTGCTTCTT CCATCCAAGT TCATGCCATC AGTTTTTCGA AGACATACAA TGTAGCTGGC
TTTGGAAATG GGAACAAAAT TGGTTTAGAT GTCACACTTG TTAATCTTCC TCCTTTACTC
AATGGTTATA CATACGATAC AAAAACCGGT ATCTTGACTC TTCGTGGTGG CGGCGTTCTA
CTGCCCATGA ACTTCAATAT TGGTTTAGGT TACAATCCAT CTCTATTCAA AATTGTCACT
GATGACAACA CAGGAATAAT TCGGATTCCT GCTGGTGCAG TAACCTACTC TGGTCCTCCA
CCAAATTCAG TTCCATCGGT ATGTCAACCA TGCAAGAAAC TTCCACCTGC TCCAGGAACA
AGTGCCACTG AGTTCACCAC TACTGCAACT TCCACCAATT CTGATGGATT TACATGTACA
GAAGTTGATG ACATCATAGT TTCAACAGAC AAAAGCAACT CTTGGTTCAC CAGTACATCC
ACTATTACTG CTGGGTGCAT TTCTAATCCC ACAAACACCA TCACGTCCAC A
 
Protein sequence
MLFRKYILAV LTLITSVMAR TITTNTIDRG AISLGLGDTI IEDGVYWSII DNLATAFAGN 
VDVGSGSGLY ISGLNPLLSM LVTLLLGSLT NDGIISLNAV QSLLAPTYSL VGISFTNNGE
MYLGADGSFG SPNIQITAPI WNNNGLLVFY QKTRSSASIE LGTSGLDIKN NGQICFFNEL
YTQRTNIVGT GCITLDENSS IFLSNTLLNI DTNQVFYLAD SASSIQVHAI SFSKTYNVAG
FGNGNKIGLD VTLVNLPPLL NGYTYDTKTG ILTLRGGGVL LPMNFNIGLG YNPSLFKIVT
DDNTGIIRIP AGAVTYSGPP PNSVPSVCQP CKKLPPAPGT SATEFTTTAT STNSDGFTCT
EVDDIIVSTD KSNSWFTSTS TITAGCISNP TNTITST