| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29314 |
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| Symbol | HMI1 |
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| ID | 4852040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3474721 |
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| End bp | 3477315 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640393748 |
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| Product | ATP-dependent DNA helicase HMI1, mitochondrial precursor |
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| Protein accession | XP_001386999 |
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| Protein GI | 126276399 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATA AAGACGAGGA GAACGTCTAC CACGACAATC TCAATATAGA ACTAAGGATT
GGAGTGTTGA ATCCCCAAAG TCGACCTCCA TTTAATGACT CTGCAACTAC TAGCACTTGT
GGAGTCAAGA ATTATAATCA AAAACTGAAA CAAGATCATA ATAAAGATAA CCAAGATTTT
GCAATAGATA TGTCTGAAAT GGAAGTGCCC AACAAAAGTA TTTCAGATTC TCAATCAGCA
AAACTTTCGT CTTCACAGAT GGAAGTTGTC AGCTTTCCTC CTACACCAAA TCTGATTCTA
ACAGTACAAG CTGGCCCAGG CTCGGGCAAG ACTTTTACTA TGGCAAACAG AGTAGCCTAT
ATGATATCCC ATTACAACTT GGAACCACAC GATATCCTTA TTCTATCCAT GACGAACCGT
GCTGTCCATT CGTTACGTCA AACGCTAGAT GCTATTGTAG GACCAGAAGT AGCTGGCAAT
ATCGAGTTGC GTACTTTTCA CTCCTTTTGC GCTAGTGTAG TAGACCAATA CGAACATATA
TATTTCCCTA ATAATGCCAG AAAGCAATTG ATAGACGATG TAAGTTGGCT GAGCTTTTCG
AATATATTTC TGGGGAAAAC CATCAGTCTT TCAGGCAAAA AGGTAGAAGG TACAATAACA
GCTTCTACCT TAGAAAAGAT CTTGCATGGA ATCAAGAGCG GTGAATTCAC AACGGAGCAA
GCATCGAATA AGTTCAAGGT TAGCAAGGAT TATATACATG AATTGTTGGT GTATTTGGAA
CAGAATGGGA TGATGCGGTT TCAAGATTTC GTAGCTGACG CTATTTCCAT AATGGATTCT
TCGATATCTA GCTCAGACGA AGAATCCTGG ATTCCTCAAT TGGCAAACTA CAAGGTGGTC
ATAGTAGACG AAATTCAGGA CATGCATCAC CTGCTTTTGC TGGTAATTAA AAAGGTAACA
TCATACCCTA CCTATGATCA GAAAGCTAAG CACTTGACTT TGGCAGGTGA TCCCAACCAA
TGCATCTATG AATTCTTGGG TTCATCTCCG GATTTGTTAG AGAATATTGA AAAAGAGTTT
CCAACCTTCG ATGTCAATCA CTATTATATG AGGGAGACGT ATAGGCTAAC TCCTGAAATC
CTTGACGCGG TAACTGCTTT CTCCATACGA CATCATGGCC TAAAAGATGT CTCTCTAACG
TCTGTTAAAC CAGAAAGCTT CAAACCAGTA GCATTTTCTC GAAGATCAGC ATCTGAAGAA
TGTGACTTTA TGGTGGGTGA AATAACAAGG TTGATATTCG AACTGGGAGG CCTCTTGCGC
CCTTCTGATT TTCTTATCCT AACAAGAACA AATAAGGAAA TTCAAGCCAT AGAAGATCAA
TTGCGAGATC TGTATGGAAT GAAGTCCAAC AAGTTTTCCC AGAATGCAAC ATGGGCCAGT
TCCAAGGTGC ATGTTCTTTT GGACATTCTA AACGTATTGA AAAAGGGTCC AGGTTCGGAT
TTTGCTTTAT TATGTGTCCT TCTTCGTCTA GATAAACGTC CTGGTGGAAG ATTGAGGCTA
TCAAAGTTGT TCAACATTTA TGATCAGTGG CGCATACGCA ACTCCTTGAC TAGTAATAGC
AACTTAGAAG ATTTTGTAAG ATCTGATCTT GAACAGAGCA ACAAAACAAG CAAAGGTGTA
GTTCAAAGCA AGATTTTCTC CATTTATAAA TTGGGAGACA ACAGGACTAC TTTGGATTTG
CTATCAACCT TTCTTTCCTC TGTAAGGGAA ATGAGGCAAA ATTTAGCCGT TCATCAAACG
CCAATGGCCA TACTAGAATC ATTGTTGAAT ATCATGGAAA AACTGACCTT GCTTGAGTAT
CTAAATTCTC CCGAGACTTC CGGAACTGGT AAAGCGCAAA AGTTGAGTAT TGAAGAACAA
ATAGAGGCGC ATAGAATTCG TCTTGAAAGC AGTTTATCTA CTTTCTACAA CTCGTTACGG
AGTTCATACA CTAGATATGT TGATACAAAT TCATTCAATG AGACGTTTCT TGAATTCTTC
TTGAAAACAT ACAATGACCA CGTTACAATT TTAAACGAAG ACATGATTAA TCTTTCAACA
ATTCACATGG CTAAGGGATT AGAGTTTCCT GTTGTTTTTG TTCCTGGTAA TTCTTCTGCG
TTTGGAACCT CACAGAATTG GTCCAGTTTA TTCACCGATG GAATTGTAGC TCAAGATTCA
AAGGCTAGAT TGTTCTATGT TGCTTGTACT AGAGCGAAGA GCTTATTATA TATTGGTACT
CCAGAAGAAG ATACCTCTAC TTGTAGAGAC TTTTTTCGTC TTCTTACTAC CAAATTACCC
ACACTTGCTA CTAAGATCAA TAGTAGAGGA TCATTGCTAG ATAACTTGGG AGTGGATTTG
AAAAGAACAG TTCCTAATAG ACGAAAGATA GAACAGGGAC GCTCGTTTTA TGCAGAGATT
CCTCTCCGTA ATCATGCAAC TGACATTAGC TTACGGGCTA CTCGTAATCT ACATATTTCA
CATTGTCGTA CTACTGTTCA AAACAATGTT CGGAGATCAA TGATAACATG GGGTAGATAT
ATATTGCATA TTTGA
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| Protein sequence | MNHKDEENVY HDNLNIELRI GVLNPQSRPP FNDSATTSTC GVKNYNQKLK QDHNKDNQDF
AIDMSEMEVP NKSISDSQSA KLSSSQMEVV SFPPTPNLIL TVQAGPGSGK TFTMANRVAY
MISHYNLEPH DILILSMTNR AVHSLRQTLD AIVGPEVAGN IELRTFHSFC ASVVDQYEHI
YFPNNARKQL IDDVSWLSFS NIFLGKTISL SGKKVEGTIT ASTLEKILHG IKSGEFTTEQ
ASNKFKVSKD YIHELLVYLE QNGMMRFQDF VADAISIMDS SISSSDEESW IPQLANYKVV
IVDEIQDMHH LLLLVIKKVT SYPTYDQKAK HLTLAGDPNQ CIYEFLGSSP DLLENIEKEF
PTFDVNHYYM RETYRLTPEI LDAVTAFSIR HHGLKDVSLT SVKPESFKPV AFSRRSASEE
CDFMVGEITR LIFELGGLLR PSDFLILTRT NKEIQAIEDQ LRDLYGMKSN KFSQNATWAS
SKVHVLLDIL NVLKKGPGSD FALLCVLLRL DKRPGGRLRL SKLFNIYDQW RIRNSLTSNS
NLEDFVRSDL EQSNKTSKGV VQSKIFSIYK LGDNRTTLDL LSTFLSSVRE MRQNLAVHQT
PMAILESLLN IMEKLTLLEY LNSPETSGTG KAQKLSIEEQ IEAHRIRLES SLSTFYNSLR
SSYTRYVDTN SFNETFLEFF LKTYNDHVTI LNEDMINLST IHMAKGLEFP VVFVPGNSSA
FGTSQNWSSL FTDGIVAQDS KARLFYVACT RAKSLLYIGT PEEDTSTCRD FFRLLTTKLP
TLATKINSRG SLLDNLGVDL KRTVPNRRKI EQGRSFYAEI PLRNHATDIS LRATRNLHIS
HCRTTVQNNV RRSMITWGRY ILHI
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