Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29294 |
Symbol | FEN2 |
ID | 4852021 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 3431082 |
End bp | 3432812 |
Gene Length | 1731 bp |
Protein Length | 557 aa |
Translation table | |
GC content | 41% |
IMG OID | 640393729 |
Product | putative pantothenate transporter |
Protein accession | XP_001387229 |
Protein GI | 126276332 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTAT GGAGCAAAAT TAAGTCTACT CTACTTGCTG CTGAAAATGA AGCTATAGCC AAAAGGAAAC GGCCTCAAAT AACCGCTGCT CCCGACGGAA GCACCGAAAA GGGAGGTGAC ATCGCTATTG ACCAAATCAG TGTAACTAGC GATGAACCTT ACATTGATTT GTCGTTGAAC TTGACACCCG AGGAAATTCA CTACAGAGAA ACTTCCAAAT GGTTCAAGGT CAAGAAATTT TTGTGGGATG GAGTTGACAA GCACCCCAAG GAACAAAGAT ATTTGCTCAA ATTGGACTTC TTTCTTTTGA CATCTTCCTG CTTAGGTTAT TTCATAAAGA ACTTGAACCA GTCCAACATT ACTACTGCCT ACGTTAATGG AATGAACGAA TACTATACCA TGAACAAGAA CCAGTATAAC TATTTAACCA CCCTCTTCAC GGTTGGTTAT ATTATCGGCC AAATCCCTTC TAACTTGATC TTGCACCGTA TTTCTGCCAG ATTTTATTTG GGAACATTAG AAATCATCTG GTCCATTTTA ACTGTGTTGA TGATTACATG TGGTCGAGAC AATATCAGAG GAATGTATGC TATCAGATTC ATTTTGGGAT TTGTTGAGAG TGGTTACTTC CCTGCCCTTG GTACGTATGA ATATACCTGA AGTTTAAAAC AAGATTGAAT ACTAACCTTT TATGAAGAGT ACTTGGTCGG CTCTAACTAC AGTGCACCTG AAATTACCAA GAGATCGGCG TTTTTTGCAA TCTCAGGGAA CTTGAGTGGA ATCATCTCTG GTCCTTTACA ACAAGCAATT ATCCAGAGAT TCGGAGAATC CAGTTTGCCA CCTTTCAAAT GGATGTTTGT CTTCGATGCA ATCATTTCAT TCCCAATCGG TGTCTACACG ATGTTCACCG ATCCCAACAC ACCTTCTACC ACTGATGCTT GGTATTTCAC AGAAGAAGAC AAATTGGTTG GCCTTGAAAG AAGAAGGGTT CAAGGAGCTG AATTGAATAC TAGGAGTCCT TACACCTGGG CAAAAATTAA GACTTTCTTC AACACTTGGC ACATTTATCT CTTTCCAGTT CTTTTCTTAA CCTATAACAA TACTGGTGCA GCTATTGGGC AACCAACTTT CCAAACGTGG ATGAAGATTA CCCTTAAATT GCCTTCCCAT GACTATAATA CTTGGCCATC TATTTTGACT GCCTGTGGTA TTGCATTAAC GATTACATTT GCATACATCA ACGATTTCTT AGGAGGAAGG AAGAACTGGT TCTTTGTTGG CCTCTACTTT GTGTTGTTGA TCTGGGGTTG TGCAATGTTG GCTGTTTGGG ATATTCCCAG AGGATTGCAC TGGTTTTCCT ACTTCCTCAT TGGTATGCCC CCAAATTGGG GCCAACCATT CATCTTTTCG TGGGTAAACA GACTTCTATA CGCAAACGAT ATGAAGAGAA ATTTCGTGGT TGTGTGTACC AATACATTGG CATACGTTAC CGGTGCTTGG GTGCCAATTT TAGTTTGGGA TACAAAGTAT CAGCCAGAGT ATTTCATAGG TTTTACGTAC ACTGCTTGCT TAGCTTCCCT TGGTCTCGTA TTAACTATCC TTGCTTGGTA TCTTACTGAT AGAGATGAAA AGAGAGCCAA GTTATTGGAC AGTGAAAGAG AAAGTGAGTC TTCGATCGAA TTTGTTGAAG AAGGCAAGAT CCAGGTTAAG AGCAGCAGCG ACCTCGATTG A
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Protein sequence | MTVWSKIKST LLAAENEAIA KRKRPQITAA PDGSTEKGGD IAIDQISVTS DEPYIDLSLN LTPEEIHYRE TSKWFKVKKF LWDGVDKHPK EQRYLLKLDF FLLTSSCLGY FIKNLNQSNI TTAYVNGMNE YYTMNKNQYN YLTTLFTVGY IIGQIPSNLI LHRISARFYL GTLEIIWSIL TVLMITCGRD NIRGMYAIRF ILGFVESGYF PALEYLVGSN YSAPEITKRS AFFAISGNLS GIISGPLQQA IIQRFGESSL PPFKWMFVFD AIISFPIGVY TMFTDPNTPS TTDAWYFTEE DKLVGLERRR VQGAELNTRS PYTWAKIKTF FNTWHIYLFP VLFLTYNNTG AAIGQPTFQT WMKITLKLPS HDYNTWPSIL TACGIALTIT FAYINDFLGG RKNWFFVGLY FVLLIWGCAM LAVWDIPRGL HWFSYFLIGM PPNWGQPFIF SWVNRLLYAN DMKRNFVVVC TNTLAYVTGA WVPILVWDTK YQPEYFIGFT YTACLASLGL VLTILAWYLT DRDEKRAKLL DSERESESSI EFVEEGKIQV KSSSDLD
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