Gene PICST_29294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29294 
SymbolFEN2 
ID4852021 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3431082 
End bp3432812 
Gene Length1731 bp 
Protein Length557 aa 
Translation table 
GC content41% 
IMG OID640393729 
Productputative pantothenate transporter 
Protein accessionXP_001387229 
Protein GI126276332 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAT GGAGCAAAAT TAAGTCTACT CTACTTGCTG CTGAAAATGA AGCTATAGCC 
AAAAGGAAAC GGCCTCAAAT AACCGCTGCT CCCGACGGAA GCACCGAAAA GGGAGGTGAC
ATCGCTATTG ACCAAATCAG TGTAACTAGC GATGAACCTT ACATTGATTT GTCGTTGAAC
TTGACACCCG AGGAAATTCA CTACAGAGAA ACTTCCAAAT GGTTCAAGGT CAAGAAATTT
TTGTGGGATG GAGTTGACAA GCACCCCAAG GAACAAAGAT ATTTGCTCAA ATTGGACTTC
TTTCTTTTGA CATCTTCCTG CTTAGGTTAT TTCATAAAGA ACTTGAACCA GTCCAACATT
ACTACTGCCT ACGTTAATGG AATGAACGAA TACTATACCA TGAACAAGAA CCAGTATAAC
TATTTAACCA CCCTCTTCAC GGTTGGTTAT ATTATCGGCC AAATCCCTTC TAACTTGATC
TTGCACCGTA TTTCTGCCAG ATTTTATTTG GGAACATTAG AAATCATCTG GTCCATTTTA
ACTGTGTTGA TGATTACATG TGGTCGAGAC AATATCAGAG GAATGTATGC TATCAGATTC
ATTTTGGGAT TTGTTGAGAG TGGTTACTTC CCTGCCCTTG GTACGTATGA ATATACCTGA
AGTTTAAAAC AAGATTGAAT ACTAACCTTT TATGAAGAGT ACTTGGTCGG CTCTAACTAC
AGTGCACCTG AAATTACCAA GAGATCGGCG TTTTTTGCAA TCTCAGGGAA CTTGAGTGGA
ATCATCTCTG GTCCTTTACA ACAAGCAATT ATCCAGAGAT TCGGAGAATC CAGTTTGCCA
CCTTTCAAAT GGATGTTTGT CTTCGATGCA ATCATTTCAT TCCCAATCGG TGTCTACACG
ATGTTCACCG ATCCCAACAC ACCTTCTACC ACTGATGCTT GGTATTTCAC AGAAGAAGAC
AAATTGGTTG GCCTTGAAAG AAGAAGGGTT CAAGGAGCTG AATTGAATAC TAGGAGTCCT
TACACCTGGG CAAAAATTAA GACTTTCTTC AACACTTGGC ACATTTATCT CTTTCCAGTT
CTTTTCTTAA CCTATAACAA TACTGGTGCA GCTATTGGGC AACCAACTTT CCAAACGTGG
ATGAAGATTA CCCTTAAATT GCCTTCCCAT GACTATAATA CTTGGCCATC TATTTTGACT
GCCTGTGGTA TTGCATTAAC GATTACATTT GCATACATCA ACGATTTCTT AGGAGGAAGG
AAGAACTGGT TCTTTGTTGG CCTCTACTTT GTGTTGTTGA TCTGGGGTTG TGCAATGTTG
GCTGTTTGGG ATATTCCCAG AGGATTGCAC TGGTTTTCCT ACTTCCTCAT TGGTATGCCC
CCAAATTGGG GCCAACCATT CATCTTTTCG TGGGTAAACA GACTTCTATA CGCAAACGAT
ATGAAGAGAA ATTTCGTGGT TGTGTGTACC AATACATTGG CATACGTTAC CGGTGCTTGG
GTGCCAATTT TAGTTTGGGA TACAAAGTAT CAGCCAGAGT ATTTCATAGG TTTTACGTAC
ACTGCTTGCT TAGCTTCCCT TGGTCTCGTA TTAACTATCC TTGCTTGGTA TCTTACTGAT
AGAGATGAAA AGAGAGCCAA GTTATTGGAC AGTGAAAGAG AAAGTGAGTC TTCGATCGAA
TTTGTTGAAG AAGGCAAGAT CCAGGTTAAG AGCAGCAGCG ACCTCGATTG A
 
Protein sequence
MTVWSKIKST LLAAENEAIA KRKRPQITAA PDGSTEKGGD IAIDQISVTS DEPYIDLSLN 
LTPEEIHYRE TSKWFKVKKF LWDGVDKHPK EQRYLLKLDF FLLTSSCLGY FIKNLNQSNI
TTAYVNGMNE YYTMNKNQYN YLTTLFTVGY IIGQIPSNLI LHRISARFYL GTLEIIWSIL
TVLMITCGRD NIRGMYAIRF ILGFVESGYF PALEYLVGSN YSAPEITKRS AFFAISGNLS
GIISGPLQQA IIQRFGESSL PPFKWMFVFD AIISFPIGVY TMFTDPNTPS TTDAWYFTEE
DKLVGLERRR VQGAELNTRS PYTWAKIKTF FNTWHIYLFP VLFLTYNNTG AAIGQPTFQT
WMKITLKLPS HDYNTWPSIL TACGIALTIT FAYINDFLGG RKNWFFVGLY FVLLIWGCAM
LAVWDIPRGL HWFSYFLIGM PPNWGQPFIF SWVNRLLYAN DMKRNFVVVC TNTLAYVTGA
WVPILVWDTK YQPEYFIGFT YTACLASLGL VLTILAWYLT DRDEKRAKLL DSERESESSI
EFVEEGKIQV KSSSDLD