| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29268 |
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| Symbol | |
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| ID | 4851995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3380093 |
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| End bp | 3382036 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | |
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| GC content | 37% |
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| IMG OID | 640393703 |
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| Product | Hypothetical ORF Leucine rich repeat protein |
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| Protein accession | XP_001386972 |
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| Protein GI | 126276252 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.51633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGTAC CTCTCCTTGC TAGGTTCAGC GACCACATTG TTCAATGCAT AGTTTACAAT
CTTCCTTATT CTGTTGTTCT ATCTCTTGCT AATAAAGATT CACCGCACCA GAATGAGCTA
CTCAATGCTA TGTATAAAAA GGTTGCATTG GTACAAGAAT CAGACCAAAC ACTTAAGACT
TTGGATCCCG GGACATTGAA ACATCTATTT CTCTTCGAGC CGAAGAATGC AGACTATATC
AAAATTTCCA GCTTGGAGAT TATTGATAAA TTGCTTGAAC TGTATCCTAA TATTCGTATT
CAACAACTTG AAGTAAACCA CGATCAGATC AACCAATTGA AGGTGCTCCC CCACATGACC
GGCAAAATAC AACGTCTGGT TCTTCGTATA GGAAGCAGAC TTTACAATAA CGACCTCAAA
ACTGATACTT ATATTGATGT ATCTAAGATT ATAGAAGAAG TACCGTTCGA TTTTATTCAA
AAACTTTCCT TACTTGAGAT TGATTTGAGA GGTTTTGAAC AGTCCAGAGG CATAGCACTC
AATGCACCAA ATTTAAGCAA TTTAACTGAT CTTCATTTAT ACAATGTGTC AGCAGATAAA
TTGATAGACC TACCTCCGAA TTTGAAAAAT CTTGTACTTG TTGAAGATGA CAAAGATCAT
GTCATTAATG AACCCATTAG TCTAACCCAT TTACACTTCT TGGTTTCAGT CAGAATTGAA
TCCATCGACT TCAACGAACG CTTAGAGGTT CTTTATCTAC CAACTCAACT ACAGAGATTA
TCTTTGCGTT CTGTCAAACT ACCCAGAGGG TTTGACACGA TATGTGAATT GCCGAATTTG
ACGTATCTAC TGTTGTCTGG GACAATTCAC GAAGAGGTTG GTGACATCCT TTCATGTAAT
GATATCGAAG AGTTCGAACT ACAATTGTGG TTTCTAGATT CGACCGATCG TGTCCTCCAG
ACATTTCCCG TACAAAAAAA TTTAAAAAGA ATGATCTTAG GAGGAAGATT CGAGTCGTCA
CTAGCACACA GCTTTGCTTC GTTATCCTCA CTAACACTTT CCCACACGAC TTTGTCCAGT
ATTCCTTTGT TCGAAAATTT GAAATACTTT CAAATAACCC ACCTGGCCTT TGAAAGGCAT
AGTTTGTCTA ACAGCTTCAA ACATTTAAGA AAATTAAACG AATTGGTTGT AAATAATTGT
CAATTAACGA TGGTTGATAG CCATTTTCCC GATAGTCTAG AGATTCTAGA TCTTTCTCAT
AATAGATTGG TTAAGATAAG TGGTGACTTA CCGTTAAACT TAAAAAGATT GAATTTGAAC
CGTAATTCAA TTTCAAGTCT ATCAGTATTA CAAAACAAAA AATTAACTGA ACTTGGCCTC
TCGTGGAATA AAATCAGAGA ACTATCCCAT AATACACTTT GTCTTCCTGA AAACTTGAGT
TCTTTGAATC TCACTGGAAA TGATATTTCT GTAATTGACC CTAGCTTCTC CTTCCCTCCG
TCCCTATTCA TTCTTCAACT TCACGTAAAT GCCTGTATTT CCATGAATTA TGTATTCAAC
ATATTACCCC AACTGCTTGT TGTCTTAAAG CTAATTGCTC AGAAGTTAAA TGGAGGGACT
GGACAAAGAA TAGAAATTTG CTTCCAGCAC CTTTGGGATG TTCATCTTTC GGGCATTGGA
AATTACAATT TCGTATGGAG AAATTGTCCA AACTTGAAGT ATCTCAAATT TGAGGAAAGT
GTAATACCTA AGATATTCGT GGAAGACTTA CCCCCAACAA TTCGAGAATT AGATCTTCGC
AAGAATGGTA TCCGTGATAT TGAAGGCGAC TTTAAAATTC TCCCTCAATT GACAAAAGTT
GATCTTGGAG AAAATCATTT ACAGGGCTGG AAGGAACTTA ATCCAGATAA GATTCTTCCT
TCCGTTATGT TGGAAGAAAA TTAG
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| Protein sequence | MCVPLLARFS DHIVQCIVYN LPYSVVLSLA NKDSPHQNEL LNAMYKKVAL VQESDQTLKT
LDPGTLKHLF LFEPKNADYI KISSLEIIDK LLELYPNIRI QQLEVNHDQI NQLKVLPHMT
GKIQRLVLRI GSRLYNNDLK TDTYIDVSKI IEEVPFDFIQ KLSLLEIDLR GFEQSRGIAL
NAPNLSNLTD LHLYNVSADK LIDLPPNLKN LVLVEDDKDH VINEPISLTH LHFLVSVRIE
SIDFNERLEV LYLPTQLQRL SLRSVKLPRG FDTICELPNL TYLLLSGTIH EEVGDILSCN
DIEEFELQLW FLDSTDRVLQ TFPVQKNLKR MILGGRFESS LAHSFASLSS LTLSHTTLSS
IPLFENLKYF QITHLAFERH SLSNSFKHLR KLNELVVNNC QLTMVDSHFP DSLEILDLSH
NRLVKISGDL PLNLKRLNLN RNSISSLSVL QNKKLTELGL SWNKIRELSH NTLCLPENLS
SLNLTGNDIS VIDPSFSFPP SLFILQLHVN ACISMNYVFN ILPQLLVVLK LIAQKLNGGT
GQRIEICFQH LWDVHLSGIG NYNFVWRNCP NLKYLKFEES VIPKIFVEDL PPTIRELDLR
KNGIRDIEGD FKILPQLTKV DLGENHLQGW KELNPDKILP SVMLEEN
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