| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29213 |
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| Symbol | DUR5.2 |
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| ID | 4851942 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3258410 |
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| End bp | 3260577 |
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| Gene Length | 2168 bp |
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| Protein Length | 668 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393650 |
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| Product | urea transport protein |
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| Protein accession | XP_001386945 |
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| Protein GI | 126276093 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0581449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTG CTTCCCAATC TGTTGAATTA TTGGGCCAAG GTGCCGGGTA TGGAATTTTG
GTCGGTGTCG GTGCCCTTTT CGCCGGCGGT ATGATCTTGA CCACAAAATT ATTACAAAGA
TATTTACATG AGAATTCCAA TTCCACCGAA ACTTTTGCTG TGGCTAATAG AAGTGTTGGA
GTATGTACTT GCAGAATTTT CAGATTTTCA CTCGCATATT TTTTCATTGA TAAGATTGCG
ATCTAGTTGC AAAATTTAAT ATTTTATTGA ACCATTTTAC TAACTATTTG CTCTAGACAT
TTCTTTCAGC TTCGGCAGTC TACTCATCCT GGTCTTGGGC CACGGAATTG TTGTGGACGT
CTACAATGGT GTACAACTAT GGTATCCAAG CTTCATATTA CTATGGTGCT GGTTTAGCTG
TACAAATTGC CGTGATGTCT GTGATCGGGA TTCACGCTAA GAAGAAGGCT CCTAGTGCAC
ACACATCGTT AGAAATAGTC GAATTGAGGT ATGGAAGAGT TGGACATATA CTCTACTTAT
TCCTTGGATT GGCAAACAAC TTGCTTTCGT GTGCTTCCAT GATTCTTGGT GCATCTGGTG
CCATTTCCAT TATTGCTGGC AATTTGCACC CAGTCGCATC CACCATGCTT ATTCCATTTG
GTGTGTTACT TTACACTGTG GTTGGTGGAT TAAAGGCCAC TTTCTTGACT GATTTTGTCC
ATACATTAAT CTTACTTTTG GTGTTATGTT ATCTTAATAC CTCGGTTCTC ACTTCTGACC
AAATCGGTGG CTTGGACGGC TTGTACAACG CTTTAGTCAA GAAAGACGGT GAACGTTACA
TAGAAGGTAA CTTCGATGGT TCCATATTGA CAGGAAAGTC TAAGGGTGCC TTATTTTTCG
GTTTGATTTT AACTGCTGGT AACTTCGGCT TGACTGTGTT GGATTCTTCT TTCTGGCAAA
AGACTTTTTC AGCAAGTCCA AGAGCAACAG TTCCAGCTTA CTTAATTGCT TGTTTCTTCA
TTTTTGCAAA TGTCTGGCCC TTGGGTTCAA TTATCGGTGG AGCTTCTATT GTTTTAGAAG
GTACACCAGG CTGGCCAACA TACCCAAGAG AGATGACTCA ATATGAAATC GATTCTGGTT
TCGTTTTGCC ATATGTATTG AAGCAAGTGT TGGGTAACGG AGGAGTTGGA GCTCTTCTTT
TGGTCATCTA TTTGGCTGTT ACATCCACCG TCAGTGCTCA AATGATTTCC GTGAGTAGTA
TTCTTTCCTT TGATATCTAC AAGAAGTACA TCAATCCAAG TGCTCAGAAC AAACAAATGA
TCAGAATCTC ACACATTAGT GTCGTATTCT TTGGTCTTTT CTGTGCTGCA TTCTCTGTGA
TGTTGCATTA CGTTGGTGTG AATATGACCT GGTTAGGTTA CTTTATTCCA ATGATTATCT
GTCCTGGTGT TCTTCCATTG ATTTTTACCA TTACTTGGGA TAGACAAACT ACTCTTGCTG
TTGTTGCTGC CCCTATATCT GGATTTATAT TCGGCATTTC AATCTGGTTG TCTACTGCTT
ATCACTACTA TGGAGAAGTT ACAATTACAA GTACCGGTGG CCAATTGCCA GCTTTGTTCG
GTTCTTTGAC TTCTTTGTTT CTTCCAGGTG TTGTATCCAT AGTCATCAGT TTGTTCTCCT
CACAAAAGTT CGACTGGAGC CAATTGCAAC AAGCTGATCT TATTATTGCA GACGACACTT
CAATTGAGGA GATAGTCAAG AATGATGGAG AAGTGTCTAG CGACATAAAC GAAAAGACCA
GCCCCGTTCA TACCACCGTC AATGATACAG GCTCCAAGCA AGAGAGTTCT ACACAAGAAA
GTGAAAAGAG TGTTATTGGT GAAGAATTAG AACCTCATCA ATTGTCTGAA CGTGAACTTG
ATTTCTGGAT TAAGATTTCT ACAGGTGCTG CTATATTTGT TCTTTTGATC ACTTGGGTTC
TCTGGCCATT ACCGTTATAC AGAGATTGGA AGTTTACAAG AGCTTATTTT AAGGGTTATG
TCACTGTTTC TCTTATTTGG CTCTACTCTG CATTAATCGT CATCGGTATT ATGCCTCTCT
ACGGTGGAAG GCATTCAATT GCTAGAATCT TTAAAGGAAT CTATAGAGAC TTCATCAAGA
GAAGCTAG
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| Protein sequence | MSSASQSVEL LGQGAGYGIL VGVGALFAGG MILTTKLLQR YLHENSNSTE TFAVANRSVG
TFLSASAVYS SWSWATELLW TSTMVYNYGI QASYYYGAGL AVQIAVMSVI GIHAKKKAPS
AHTSLEIVEL RYGRVGHILY LFLGLANNLL SCASMILGAS GAISIIAGNL HPVASTMLIP
FGVLLYTVVG GLKATFLTDF VHTLILLLVL CYLNTSVLTS DQIGGLDGLY NALVKKDGER
YIEGNFDGSI LTGKSKGALF FGLILTAGNF GLTVLDSSFW QKTFSASPRA TVPAYLIACF
FIFANVWPLG SIIGGASIVL EGTPGWPTYP REMTQYEIDS GFVLPYVLKQ VLGNGGVGAL
LLVIYLAVTS TVSAQMISVS SILSFDIYKK YINPSAQNKQ MIRISHISVV FFGLFCAAFS
VMLHYVGVNM TWLGYFIPMI ICPGVLPLIF TITWDRQTTL AVVAAPISGF IFGISIWLST
AYHYYGEVTI TSTGGQLPAL FGSLTSLFLP GVVSIVISLF SSQKFDWSQL QQADLIIADD
TSIEEIVKND GEVSSDINEK TSPVHTTVND TGSKQEKPHQ LSERELDFWI KISTGAAIFV
LLITWVLWPL PLYRDWKFTR AYFKGYVTVS LIWLYSALIV IGIMPLYGGR HSIARIFKGI
YRDFIKRS
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