Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29203 |
Symbol | BCK4 |
ID | 4851932 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 3226694 |
End bp | 3228329 |
Gene Length | 1636 bp |
Protein Length | 517 aa |
Translation table | |
GC content | 42% |
IMG OID | 640393640 |
Product | probable pyruvate dehydrogenase kinase |
Protein accession | XP_001387186 |
Protein GI | 126276060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0107384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATC TAACCCCATT TTCCATACAC AAAACAGCTG CGTATGAAAA TTCATTTATC TGCACCATGC AGGCTCCGTA CGTACGACTC TTAATTCTTC AGCATATAAT CATCTTGCAG TGCAAATATC ACAGTTGTTT CTCTCTTCTA TCTTAGTAGA GCGATGCTTC AAACAGCTCG AATTCAGAAA CATTGCTCGC GCTCCTGTGG ATCAATCTCA GTCTTGGTCC GAGGATATTC TCTGGAGCAT TCGCCCATTA CAGCCCATTC TTACATTAAT GATGACTTTC TCTCCACGAT AAGCAAACAG GAAATCGCTA AACACCTCAA GAACTTGGGT CCATTTCCCA CGTACTCAAA CATTTTGAAT CAGCAACATT TTTACCAGAA TGAGGTGTTG ATGGAGTATC TGAAGCGGGA TCCACATCCT GTTTCGCTTC GTCAATTGGC AGGTTATGGA AACAAACTCA CCAAACAGAA GATCTTGAAC AGTGCCAACT TCGTCAGAAT AGAATTGCCC ATCAGATTAG CTATTCGTAT AAGAGACTTG CAAACATTGC CGTTTGGGGT GGTCAATAAT TTCCATTTGG CTCAAATCTA CGAATCGTAC TATCATCTGT TCAATGCCTT CAGAAAGATA CCCCAGATTA ATACCTTGGA CCAGAATGAC AAGTTTTGTG AAACGTTACT GTCTTTGTTG GACGATCATG TATTCAACTT ATCTCATCTT ATGATGGGAG CGTTGGAAGT GTCCATCTTG AACAACTTGG GCCGTGAGGA GTTGGACAAT TTCATGAGTT CGATGTTGAG ATCCAGAATT AGTAGAAGGG TCATTGTCGA AGAACACTTA TCCCTTTCAG AGAATTACCG TTCGAATCCA TATGCTGTGA AACCTCCTCA TTATCTTGGT GAGATCTTTC ACGACTGTAA GGCAATTGAC CATTTCAAAA TAGTGGCAGA TATGATCAAG AAGTCGATGG TATCCATTTT TCCCAACATC GACAACATGC CTGATTTAGA AATTGAAGGA GATTTGTCCA CCAGCTTTCC ATTTATGGTT CCTCATTTGC ATTATTTACT TTCTGAAATA TTGAGAAACT CTTATGAGGC TACGATAAAG ACACATGCTA AAATGACATC GAAAAAGTTG CCTTCAATCA GAATTACAAT CATCAACTTG AAGAAAGAAG TCATATTCAG GATTTCTGAC CAGGGTGGAG GTATCAGCCA CGATCAGTTA AAGAGTGTCT GGTCATTCTG CAAAGCTCCT GACTTGGCCA GAAACAGTCT TGCCAACTTC CATCGGATTC CTGGCTTGCA ATTGTACTCA AACTTAAAGG TGACTCCTGC CGGGTCGTCG ATAGTCTCAA ACGCAAATTC GCAGAAACTC TTGTCTTCAA CATCCTTGGA TGATGTTGAT GCCTCTACAA AGAAGAAGAA GTCCACTTTG GATAGGTTGA TCGACCGGCC CTATGAGAAT AAGCTCGGGT TGGGCTTGCC TATGTGTAAA GTATATGCTG ATTACTGGAA TGGAGAATTG ACCATGAACT CGTTGGAAGG ATATGGTAGT GATACCAGCT TGACGTTGAA GAAGTTGGGG TACCATTCCA ATGTGATGCA ATTGGACAGA GCATGA
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Protein sequence | MTHLTPFSIH KTAAYENSFI CTMQAPAMLQ TARIQKHCSR SCGSISVLVR GYSLEHSPIT AHSYINDDFL STISKQEIAK HLKNLGPFPT YSNILNQQHF YQNEVLMEYL KRDPHPVSLR QLAGYGNKLT KQKILNSANF VRIELPIRLA IRIRDLQTLP FGVVNNFHLA QIYESYYHLF NAFRKIPQIN TLDQNDKFCE TLLSLLDDHV FNLSHLMMGA LEVSILNNLG REELDNFMSS MLRSRISRRV IVEEHLSLSE NYRSNPYAVK PPHYLGEIFH DCKAIDHFKI VADMIKKSMV SIFPNIDNMP DLEIEGDLST SFPFMVPHLH YLLSEILRNS YEATIKTHAK MTSKKLPSIR ITIINLKKEV IFRISDQGGG ISHDQLKSVW SFCKAPDLAR NSLANFHRIP GLQLYSNLKV TPAGSSIVSN ANSQKLLSST SLDDVDASTK KKKSTLDRLI DRPYENKLGL GLPMCKVYAD YWNGELTMNS LEGYGSDTSL TLKKLGYHSN VMQLDRA
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