Gene PICST_29203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29203 
SymbolBCK4 
ID4851932 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3226694 
End bp3228329 
Gene Length1636 bp 
Protein Length517 aa 
Translation table 
GC content42% 
IMG OID640393640 
Productprobable pyruvate dehydrogenase kinase 
Protein accessionXP_001387186 
Protein GI126276060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0107384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATC TAACCCCATT TTCCATACAC AAAACAGCTG CGTATGAAAA TTCATTTATC 
TGCACCATGC AGGCTCCGTA CGTACGACTC TTAATTCTTC AGCATATAAT CATCTTGCAG
TGCAAATATC ACAGTTGTTT CTCTCTTCTA TCTTAGTAGA GCGATGCTTC AAACAGCTCG
AATTCAGAAA CATTGCTCGC GCTCCTGTGG ATCAATCTCA GTCTTGGTCC GAGGATATTC
TCTGGAGCAT TCGCCCATTA CAGCCCATTC TTACATTAAT GATGACTTTC TCTCCACGAT
AAGCAAACAG GAAATCGCTA AACACCTCAA GAACTTGGGT CCATTTCCCA CGTACTCAAA
CATTTTGAAT CAGCAACATT TTTACCAGAA TGAGGTGTTG ATGGAGTATC TGAAGCGGGA
TCCACATCCT GTTTCGCTTC GTCAATTGGC AGGTTATGGA AACAAACTCA CCAAACAGAA
GATCTTGAAC AGTGCCAACT TCGTCAGAAT AGAATTGCCC ATCAGATTAG CTATTCGTAT
AAGAGACTTG CAAACATTGC CGTTTGGGGT GGTCAATAAT TTCCATTTGG CTCAAATCTA
CGAATCGTAC TATCATCTGT TCAATGCCTT CAGAAAGATA CCCCAGATTA ATACCTTGGA
CCAGAATGAC AAGTTTTGTG AAACGTTACT GTCTTTGTTG GACGATCATG TATTCAACTT
ATCTCATCTT ATGATGGGAG CGTTGGAAGT GTCCATCTTG AACAACTTGG GCCGTGAGGA
GTTGGACAAT TTCATGAGTT CGATGTTGAG ATCCAGAATT AGTAGAAGGG TCATTGTCGA
AGAACACTTA TCCCTTTCAG AGAATTACCG TTCGAATCCA TATGCTGTGA AACCTCCTCA
TTATCTTGGT GAGATCTTTC ACGACTGTAA GGCAATTGAC CATTTCAAAA TAGTGGCAGA
TATGATCAAG AAGTCGATGG TATCCATTTT TCCCAACATC GACAACATGC CTGATTTAGA
AATTGAAGGA GATTTGTCCA CCAGCTTTCC ATTTATGGTT CCTCATTTGC ATTATTTACT
TTCTGAAATA TTGAGAAACT CTTATGAGGC TACGATAAAG ACACATGCTA AAATGACATC
GAAAAAGTTG CCTTCAATCA GAATTACAAT CATCAACTTG AAGAAAGAAG TCATATTCAG
GATTTCTGAC CAGGGTGGAG GTATCAGCCA CGATCAGTTA AAGAGTGTCT GGTCATTCTG
CAAAGCTCCT GACTTGGCCA GAAACAGTCT TGCCAACTTC CATCGGATTC CTGGCTTGCA
ATTGTACTCA AACTTAAAGG TGACTCCTGC CGGGTCGTCG ATAGTCTCAA ACGCAAATTC
GCAGAAACTC TTGTCTTCAA CATCCTTGGA TGATGTTGAT GCCTCTACAA AGAAGAAGAA
GTCCACTTTG GATAGGTTGA TCGACCGGCC CTATGAGAAT AAGCTCGGGT TGGGCTTGCC
TATGTGTAAA GTATATGCTG ATTACTGGAA TGGAGAATTG ACCATGAACT CGTTGGAAGG
ATATGGTAGT GATACCAGCT TGACGTTGAA GAAGTTGGGG TACCATTCCA ATGTGATGCA
ATTGGACAGA GCATGA
 
Protein sequence
MTHLTPFSIH KTAAYENSFI CTMQAPAMLQ TARIQKHCSR SCGSISVLVR GYSLEHSPIT 
AHSYINDDFL STISKQEIAK HLKNLGPFPT YSNILNQQHF YQNEVLMEYL KRDPHPVSLR
QLAGYGNKLT KQKILNSANF VRIELPIRLA IRIRDLQTLP FGVVNNFHLA QIYESYYHLF
NAFRKIPQIN TLDQNDKFCE TLLSLLDDHV FNLSHLMMGA LEVSILNNLG REELDNFMSS
MLRSRISRRV IVEEHLSLSE NYRSNPYAVK PPHYLGEIFH DCKAIDHFKI VADMIKKSMV
SIFPNIDNMP DLEIEGDLST SFPFMVPHLH YLLSEILRNS YEATIKTHAK MTSKKLPSIR
ITIINLKKEV IFRISDQGGG ISHDQLKSVW SFCKAPDLAR NSLANFHRIP GLQLYSNLKV
TPAGSSIVSN ANSQKLLSST SLDDVDASTK KKKSTLDRLI DRPYENKLGL GLPMCKVYAD
YWNGELTMNS LEGYGSDTSL TLKKLGYHSN VMQLDRA