Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29166 |
Symbol | |
ID | 4851898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 3131606 |
End bp | 3133435 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | |
GC content | 45% |
IMG OID | 640393606 |
Product | CBS domain-containing protein |
Protein accession | XP_001386928 |
Protein GI | 126275953 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCT TTAAGACCCC CAGAAAGTCT GGCAGTGCCA CGTCTGGATC TTCCACTACA GCGGTAGATA GTGCTGTCTC AGATTCCAGA AAGAGACAGA CCAAGCGAGA TGATGCTATC AGAAGAAGAA TCGAAAACGA CTTGAACAAG AAAAAAAGAG GAGGAACAAG AACCTCTCGC AATCGTAGAG CAGCTCCCGG AACTGTTTTA TCGTTAAAGC CTACTGACCC CATCATTTGC AAGACTTCTT CTACAGTGTA TGAAGTATCG CAGTTGATGA CAGCTAGAAG AGAGAACTGT GTGCTTGTGG TCAACGATGT AGGAGAGTTG TTGGGGATTT TCACAGCTAA GGATTTGGCT TTCAGAGTGG TTGGTTCGAG CTTGAATGCT AACTCAGTCA CTATTGATCA GATCATGACT CCCAACCCAC AGTGTGCAAA TGCCAACGCT GCTGCGTCTG AAGCTTTGAC TCTCATGGTG GAAAGAGGGT TCAGACACTT GCCCGTTTTG GACGACAACA ACCAGATCGT CGGTGTTTTG GATATTACTA AATGCTACGC CCAACAAATG GAGAAGTTGG AAAGGATGCA TGCCTCTTCC AAAAAGTTGT ACGAGGCTTT GGATTCTGTC CATTCAGAAA TGGGCGTTGG ACAGCAACCA CTCCAGGTGT TCAAATATTT TGAGAACTTG AAGAGCAAGA TGAACGGGCC CACTTTGGAG TCGGTTTTGG ATGCAAACAC CGTGCCAGTG TATAGCAATG TGAAGTCTAC AGTGTATGAA GCTACTGTTC TCATGAAAGA GAACAGAACT ACTGCAGTTC TTGTCAAGGA TAATAATGAC GAGGTCACGG GAATTTTCAC CTCTAAAGAT GTGGTATTAC GAGTCATAGC TGCTGGTTTA GACCCCAAGA ACTGTTCTAT AGTCAGAGTC ATGACTCCTC AGCCAGATGT AGCCAAGGTC AACTTGCCCA TTCAGCAGGC TTTGAGGCAG ATGTTCGAGG GCCATTACTT GAACTTACCT GTAGTCGGCG ACCAAAACGA TATCATCGGA ATAGTGGAGG TGTTGAAGTT GACGTATGCC ACTTTGAACC AAATTAAACA GCTTGAAACA GCTGACTCTG TAGAGCAATC AGGTGCTACT TTGGAGCAGC AGGATTCGGA GGGTCCAGCT TGGAACAAGT TCTGGACTTC GATGGATGAC GATGACAGCG ATTCTGTCCA CTCTGGTTCC ATCACAGGAA GTGCTCCAGA TGTGACAGCT TCTGAGTTCC AATCCTTTAA CATCGACATC AAACCTTCTG ACTCCATTTC CTACGTAGAG TCGCCCGTAA AGCCAGCTAG ACAATCCACT TTATCTTCTC CAATTGAGGA TGACTTACCC TTCACTTTCA AATTCAAATC CCCAGCCATT GAAGGAAGAG TGCACCGTAT ATCTATAAGA GCCAGCGAAG GGCTTGACAA GTTGCGGGCT TTGATGGACG CGAAATTGCA CACTAAGGAC TTTCAGAAAT TGAAAGTGAG CAAAGATAAT AGCGACGAAT TGTATGCTAT CAGTTACGTA GACGACGAAG GAGATATTGT TTCGATTACG TCTGACAATG ACCTTGTCGA ATGTATTGCT ATTAATACCA GACTAGACAA TGACAAGGCA GACCTCTACC TTCATAACCC TCACGAGCAT GCCCCAGTGG ACACTATCAA AAGAAGTCTT CACGACAAGA GAGCCAAGAC GACTATTATC GAAGGTGTTT CCAACGAGTT GTTGATTTCA GGAGCTTTGG CGTTCTTGGC TTCATCCATA GTTGTCGGCT TGACCCTTAC TAGAAAATAG
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Protein sequence | MSSFKTPRKS GSATSGSSTT AVDSAVSDSR KRQTKRDDAI RRRIENDLNK KKRGGTRTSR NRRAAPGTVL SLKPTDPIIC KTSSTVYEVS QLMTARRENC VLVVNDVGEL LGIFTAKDLA FRVVGSSLNA NSVTIDQIMT PNPQCANANA AASEALTLMV ERGFRHLPVL DDNNQIVGVL DITKCYAQQM EKLERMHASS KKLYEALDSV HSEMGVGQQP LQVFKYFENL KSKMNGPTLE SVLDANTVPV YSNVKSTVYE ATVLMKENRT TAVLVKDNND EVTGIFTSKD VVLRVIAAGL DPKNCSIVRV MTPQPDVAKV NLPIQQALRQ MFEGHYLNLP VVGDQNDIIG IVEVLKLTYA TLNQIKQLET ADSVEQSGAT LEQQDSEGPA WNKFWTSMDD DDSDSVHSGS ITGSAPDVTA SEFQSFNIDI KPSDSISYVE SPVKPARQST LSSPIEDDLP FTFKFKSPAI EGRVHRISIR ASEGLDKLRA LMDAKLHTKD FQKLKVSKDN SDELYAISYV DDEGDIVSIT SDNDLVECIA INTRLDNDKA DLYLHNPHEH APVDTIKRSL HDKRAKTTII EGVSNELLIS GALAFLASSI VVGLTLTRK
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