Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29131 |
Symbol | |
ID | 4851865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 3045505 |
End bp | 3046242 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | |
GC content | 41% |
IMG OID | 640393573 |
Product | predicted protein |
Protein accession | XP_001386912 |
Protein GI | 126275837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.19267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCA ACCACCGCCC AACGTTGGAG TCCAAGCGAG GGAAAGTCAA CAGTATTACC GATACAATCT CACATTCGAG AGCTTTACCT CAGCAAACGA CATTGAAATA CAGAGAAGAT GGGAGTAAAG TAGAGCACAA GAAAGGAAAG CGAGCTCTCG AAGAGTTGAA GACCGAATTG TTGATTAGAG AGGGTCGATT GCCAGAACTT TCTGAAAATG ATCACATTTC AAAGAGAATA AAGCTAAAGG AAAATCATGA AAACTTACAA ATTAAAGAAA CTGAAGAAGG AAACAATGAC ATTGGGATAG ATGATGACAA CGAAGATAAA ATTGACAACA AAAGTGACGA AGATGGCGAC GTAAGCAATG ATAATGAAGG TGACGATATT GATAGTTACA GCGGGCTGGA AGATTCTGAA TCAGATGACG AAGGTGATTC GGAGGATGAG ACAGAACTTC TTCTTGCGGA GTTAGCCAAG ATTCGACAGG AAAGACAAGA GGAGAAGGAA AGAGTCGAAG AACAAGCGAA GATAGACAGA GCATTACTGT CGAATCCATT GGTGTCAGTA AAAAGCGAAG ACAAAGACAA AATAGAAGAA GCGCCGAAAA AGAAAAGCTG GAGACTGACT ACTACCTTCA GCAATAGACC CAACAAAGTT TCGGAACAGG ATACATATAC AAACGATACA CTTAGATCTA AGCACCACCA AAACTTCCTT AACAAATTCG TTAGATAG
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Protein sequence | MTTNHRPTLE SKRGKVNSIT DTISHSRALP QQTTLKYRED GSKVEHKKGK RALEELKTEL LIREGRLPEL SENDHISKRI KLKENHENLQ IKETEEGNND IGIDDDNEDK IDNKSDEDGD VSNDNEGDDI DSYSGLEDSE SDDEGDSEDE TELLLAELAK IRQERQEEKE RVEEQAKIDR ALLSNPLVSV KSEDKDKIEE APKKKSWRLT TTFSNRPNKV SEQDTYTNDT LRSKHHQNFL NKFVR
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