Gene PICST_29131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29131 
Symbol 
ID4851865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3045505 
End bp3046242 
Gene Length738 bp 
Protein Length245 aa 
Translation table 
GC content41% 
IMG OID640393573 
Productpredicted protein 
Protein accessionXP_001386912 
Protein GI126275837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.19267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCA ACCACCGCCC AACGTTGGAG TCCAAGCGAG GGAAAGTCAA CAGTATTACC 
GATACAATCT CACATTCGAG AGCTTTACCT CAGCAAACGA CATTGAAATA CAGAGAAGAT
GGGAGTAAAG TAGAGCACAA GAAAGGAAAG CGAGCTCTCG AAGAGTTGAA GACCGAATTG
TTGATTAGAG AGGGTCGATT GCCAGAACTT TCTGAAAATG ATCACATTTC AAAGAGAATA
AAGCTAAAGG AAAATCATGA AAACTTACAA ATTAAAGAAA CTGAAGAAGG AAACAATGAC
ATTGGGATAG ATGATGACAA CGAAGATAAA ATTGACAACA AAAGTGACGA AGATGGCGAC
GTAAGCAATG ATAATGAAGG TGACGATATT GATAGTTACA GCGGGCTGGA AGATTCTGAA
TCAGATGACG AAGGTGATTC GGAGGATGAG ACAGAACTTC TTCTTGCGGA GTTAGCCAAG
ATTCGACAGG AAAGACAAGA GGAGAAGGAA AGAGTCGAAG AACAAGCGAA GATAGACAGA
GCATTACTGT CGAATCCATT GGTGTCAGTA AAAAGCGAAG ACAAAGACAA AATAGAAGAA
GCGCCGAAAA AGAAAAGCTG GAGACTGACT ACTACCTTCA GCAATAGACC CAACAAAGTT
TCGGAACAGG ATACATATAC AAACGATACA CTTAGATCTA AGCACCACCA AAACTTCCTT
AACAAATTCG TTAGATAG
 
Protein sequence
MTTNHRPTLE SKRGKVNSIT DTISHSRALP QQTTLKYRED GSKVEHKKGK RALEELKTEL 
LIREGRLPEL SENDHISKRI KLKENHENLQ IKETEEGNND IGIDDDNEDK IDNKSDEDGD
VSNDNEGDDI DSYSGLEDSE SDDEGDSEDE TELLLAELAK IRQERQEEKE RVEEQAKIDR
ALLSNPLVSV KSEDKDKIEE APKKKSWRLT TTFSNRPNKV SEQDTYTNDT LRSKHHQNFL
NKFVR