| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28974 |
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| Symbol | SEC7 |
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| ID | 4851713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2628388 |
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| End bp | 2634180 |
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| Gene Length | 5793 bp |
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| Protein Length | 1930 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393421 |
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| Product | guanine nucleotide exchange protein for ADP-robosylation factor |
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| Protein accession | XP_001386835 |
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| Protein GI | 126275366 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5307] SEC7 domain proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.293622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGAAG TGTTTATTCA CACTAACAGA CTCTCTTTAT TCTCTCAATT CTTTTCATTC
CCAAGGGCTT TTCGAATATA CGTTACCACT TCCATACCGG TAATACCATC CGCTCCGTGC
CGCAGTCTAG ATCCATCAGA TATGCTGCCG GCAGATCCCC AGCCTGGGCC CATACTGAGG
GCCGAAGAGT CTCAGAAAGC TGTAGAAACC ACGAAAGAGC CGATCTCGAG CGAAAACGAT
ATGGATGAAG TTGACCTCAA TAGCAATGAC AATGTAGCAG GGATTGGTGC CGAGAATGGC
AAAATTCCGG ATGAAACAGA GACAGAACCG ACTCAGACCG ACGATGATGA CAGCAAATCA
CATTCATCAG AACAAAATAA CAAAAAGACT TTAGAAAAAA CTCCAGAAGT TACAAATCAG
ACAAGTGAGC AATCAGATCC AGTAAAGTCA GAGCAAAATA CCGTCAATGG CTCGGCAGAT
GTAGAAACCG CCACGAAAAC AGAGTCAGAT ACAGTGACCA ACGGAGATGT AGTTCCTCCA
GAATCTGAAT CTAATGGTGG AACTCAATCT GATGGTCAGG AACAAGCAGA AGTACAATCA
GAATCTCATG AACAATCTCA AAATGAATCC CAGATTCAAT CTGAGGCTCA ATCGGAAGCC
CATACTCGTC AACATTCAGT CGTGTCTATT GCATCTGCGA CAAATGCAGC CACTGTGGAC
AATATCAAGA TCTTCAAGAA TACGTTCGAA GAAATTGTCA ACTCCAAAGA AGCCAAGAAG
AATGCTGGCT TAAAGGAGTC TGTGCAGAAG GCATTGGATT CTCTCAATAA CGCCCAATCG
AGGGATGCTC ATTTGATCTT TGATGCCTTG AAGGAAACGT GCGAGAAGTC TAATAGCAAC
GAGTTGAAAG CCAAGGCTAT TGATCTCTTT GCAAAATTGT TTGATTATGC CCAGTTCAAT
GATGAAAACG ATAAGGCTCA TTTGACGGAA AGCTCTGTGA ACGTGATTTC GTCATGCTTT
TTGGGCGAGG GCACCGATCC AGACGTGGAA TTACAAGTAG TTCGCGCTCT TATGCACAGC
ATAGTGTTGA TGCCGTGTCA TGGAGCTCCA TTGTTAAAGG CGGTGAGACT GATCTACAAT
GTGTTCATCT TCTCTTTGTC CACGAGGAAC CAAGCAGTGG CCCAAGGGAT CTTGAACCAA
GTCATTCGAG CCATTTTCCA GCGAATCACG GACTCTGGTA TCTATAAGAA TAAGCATAAT
AGATCTGTTT CGAATTCCAA ACTCGCATTC AGATCCCCTA GTAAAGACGA CTTTGCTACT
CCAATTGACG ACAGCAGAGA GAAACTTACG TTGAAGAATT TGGAGAAGTT GAACGACGAC
GTCGAAGACA ACGACAGAGT CGACGAAGCC AACAATGCAT CCGAGCTGGA TGAAGATTTG
GTGGTTAAGG ATGCTTTTTT AATTTTCAGA GCCATGTGCA AGTTGTCTGT AAAGGACCTT
GATTCTGAGA CTATAGACAT GAAATCTCAC ACTGTCAGAT CCAAAATGTT GTCTTTACAT
ATCATCCACA CCATCTTGAA GGACCACATA GAGATATTCT TGAGCCATGA TGTGGTGATA
TTGTCATCCA ACTCTGCTGA GCAGACCAGA CTTATCAATG CCGTTAGACA GTATGTATGT
CTTTCATTGT CGAGAAATGC TGCCTCACCT TTAGCTCCTG TTTTTGAGAT TTCGTTAGAA
ATCTTCTGGT TGATCATCTC CAACTTGAGA TCAGAGTTCA AACGTGAAAT TCCTGTTTTT
TGGGATGAGA TATACTTCCC TGTTGCAGAG ATGAGAACGT CTACTCCTCA TCAAAAGCGA
TATTTATTAT CTATTGTTGA GAGATTGTGC AACGATTCCA GATGCATCAT TGAGTTCTAT
CTCAATTATG ACTGTGACAG CACGATGCCT AATATCTGCG AGAAGACTAT TGAGCTTTTG
ACGAAGTTGT CGTTAGCCAT TGTAGAAGTA ACTGCTCAAC AAAGGCAGGC ATACCGCGAG
AATCGTAGAA TGGGCATTTC TGTGTACAAC ATCGACAAGA TTGCCAACTT GACCAGTAGC
ACGATGTCAT CCAAACCTCC AGAACCAGAC ATCTACAACC ATTTTCCTTT GGAGTATGCC
TTGAAGATGA CGTCTATCAA CTGTTCTGTA GCATTTTTAA GATCGTTGTA CTCCTGGGCG
CAAAAAGGAA TCAACAATGG TACCAGTAGA ACGCTTGCTT CGAGCCAGAA CGGTTCACAG
GCTGCCCTCA ATAGAAAGAG GTCAGGCACA GTGGACTCTG CCAACTCCAC TTTGAACAAC
TCTAGAAACG CTTCTTTTGT AAACTCCAGC GAGCAATACA GTGAATCTGA TGACCCCGAA
CAGTTTGAAA ACTTGAAGCA AAGAAAAAAG GCCTTTTTAG AAGGTATCAG GCAATTCAAC
CAGAAAGCCA AGAAGGGCAT AAAGTATTTT CTCGAACACA AATTTATTGA CTCGGATAGT
CCTGAAGATA TCTCTAAGTT CTTATTGGGA ACCGAAGGCT TGGACAAGAG CGTTATTGGC
GAATATTTGG GAGAAGGTGA CGAAAGGAAT ATCGCCATAA TGCATGCATT CGTAGAACAG
ATGGAATTTT CGAACTCGGG TTTTGTAGAT GCCATGAGGA GGTTCTTGCA ATCGTTCAGA
TTGCCTGGAG AAGCACAAAA GATCGATAGA TTCATGTTGA AATTTGCCGA AAGATATGTG
TTAGGTAATC CAACTCTTTA CGCCAACGCC GATACTGCTT ATGTTTTGGC TTATTCTGTC
ATTTTGTTGA ACACAGATTT ACATTCTCCA CAAGTGAAAG TGAGAATGTC TGTGGAAAAC
TTCATAGCCA ACAATGCTGG TATAGACGAT GGTAAAGACT TGCCTCTGGA CTACTTGGTG
AAGATTTACA ACGAGATACA GTCCAACGAG ATCAAGTTGC AGTCTGAGCA GCATGCTGCT
CTCTTAGCTG GTGATATCAG TATCAGTGTG TCTACACCTT CTGTAGGTTT ATTCAGTGGT
CGCGACTTGA ATCGTGAAGC CTATATCCAC GCCTCTAAAG AGATGTCAAC CAAGACCGAG
AAGTTGATGA GAAACTTGGG TAAAAGATTA AAGTCCGATG ACTCCAATGG TGTCTTTTAT
TCTGCATCAC ATGTAGATCA TGTTAAGTCA ATTTTCGACA CGCTCTGGAT GTCAATTTTG
GCTGGATTAA CACCTCCCTT CAAAGAATAT GATGAAGAGG ATGTTACTAA TGCCTGTTTA
GAAGGTATCA AGTTATCGAT TCGAATTGCT TGCATGTTCG ACTTGTACCA CGCCAAGGAA
TCCTTCATTG GTGCACTTCT TCAGTTTGAA AATTTGCACA ACTATCAGGA AATGAAGGCA
AAGAGTGTAG AGGCTATCTA CATCATGTTG GATCTAGCTG TTACTGAAGG CAACAAACTC
ACAGATTCAT GGAACCAGAT ATTAACTTCA ATTTCACAAT TGGAGAGATT GCAATTGATT
GCTCAGGGTG TTGACCAGGC TTCGATTCCA GATGTGTCTA CTGCCAAACT TGTAAACCGA
GGATCTGTTG AAGCTTCTAG AGTTAGCACT AGTTTTTTTA GTCTGTTTAC TACGGTGACA
ACTGCTTCTC AGACAGCTTC CAACAAGTTC CATAACCAAC ACTTGTCTCC GTACGTTGCG
CAGTTGTTAA CTAAGACCGA GTTGGACGTA GCTATAGACA AAGTGTTTAC CAACAGTGTC
AATTTGACTG GTTCCAGTAT TGTAGATTTC GTGAGTGCGT TGTCTGAAGT TGTTAAGGAA
GAAATCGAAT CTTCTGGACA AAGCAGCAAC CCAAGAACCT TTGCGTTGCA GAAGGTGGTT
GACATTTGCT ACTACAATAT GAGCCGTGTT CGTTTTGAAT GGACACAATT GTGGAACATC
ATTGGCGAAA CCTTCAACGC TGTGGGCTGT CACAGTAATC TGGCTATTTC ATTTTTTGCT
TTGGATTCTT TGAGACAGTT GTCGATGAGA TTTTTGGAAA TTGAAGAGTT GGCCCACTTT
AAGTTCCAGA AGGAGTTCTT GAAGCCTTTC GAACATGTCA TAATATACAA TGACTCGTTG
GAGGTGAAGG ATATGGTATT GGAATGTATC AACAATATGA TTCTAGCTCG TGCCCGACAA
ATCAAATCTG GTTGGAAGAC CATCTTTGGA GTACTCACAT CAGCAGCTAA AGAAAACAAG
GAGAGTTTAG TGATGAAATC TTACAAGATG GCCAACTGGA TTAACAAGGA GTTCATTGGT
GAAGTCCATG CTCAGGATTC ATTTGCTAAT TTAGTGATCT GTTTCACGGA ATTGGCCAAG
AACGAACGCT TCCAAAGAGT GAGTTTGCTA TCACTTGATG TTTTGCTGAA ATTGATCAAC
CAGATTGCAC AATCAAGCTT TGGTAACGAC GAATTGAAAA AGACAGAAGC CAATGGCAAA
GAAGACACCG TCAGCAAGAA CGATAGATTG GTCAAGGTGT GGTTTCCAGT TCTCTTCGGT
TTCCATGACA TTATCATGAC TGGAGAAGAG TTGGAAGTAA GATCTCGGGC ATTGAATTAT
TTGTTTGATA TTCTCATGAG GTATGGGGAG TACTTTGAAG ATGAGTTCTG GGACAAGATC
TGTCGTCAAT TACTTTTCCC TATCTTCAGC GTTTTGAGTA ATCATTGGGA AGTTAGTCTT
GAAGATTCTA ACGACAAGCT TTCTGTTTGG TTATCCACTA CATTGATCCA GGCTTTGAAG
AGTATGATGT CGTTGTTCAC ACACTATTTT GATCCTTTGA GCAGAATGCT TGACGAGTAC
TTGAACTTGA TAATTTCTTG TATCTGTCAA GAAAACGACA CAATAGCCAG AATCGGAAGA
GAATGTATGT CGACGTTATT GAAAGAAAAC GCTACAAGAT TCACTGATGA ACATTGGATC
CACATTTCTG GAGCGTTTAC CAACTTGTTT GATTTGACTA CAGCTAAGGA ATTGTTCACT
TCCGATCCAT TGCTTAACCG TGTGAGATCA CAAGATCACG AGAACGGCGA TGTTGGATCT
CAAGTGGATT TGGACGACCC ACAATCACCC AAGAAAACAT TGATAGATGA TGCGGAGGCC
AGATTGAAGA AATCGAGAGA AAAATCGTCA ATTGTCGTCA AGAGTGTTTT GCAATTGCTT
TTGATTCAAA CCTTGTCTGA ATTGTTCGAA AGTGAAAACT TCTACGAAGC TATTCCCTAC
ACTCATTTGA TCAAGATAGC GTTCCTCTTG AACTCGAGTT ATACATTTGC TCGCACATTC
AACGACGACT ATGACTTGCG GGTTCGTTTG TGGAATGCTG GTGTTATCGA GAGGTTACCC
AACTTGTTGA AGCAGGAGTC TTCGTCTTCT GCCGTTTTCA TTAACATCAT GTTCAAGATG
TATTGTGATG ATGACAAGAC AGATGCTTCA GCAAAGAAGA CAATAATGGA GTCGATCATT
CCATTGTGTA ATATAATTAC TGAGAGATAT GCTGATTTTG ACGAGAACAA CCAACAGAGA
AACATCACCA CTTGGAAGCC GGTCATTGTT GAGATTTTCC ACGGCTACGT AGAGTTGGAT
GACGAAGACT TTGTTGAACA TGCTCCTACA ATGTACAAGT TGTCGTTGAA ATTGTTTACG
AAGAATATGA CAGCAGATTT GAGACAGCTG GTGAGGGCAT TCTTGTCGAG AGTTGGCGAT
GAGTTCATAG ACAAGGTTGC TACTACCAAT TAG
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| Protein sequence | MWEVFIHTNR LSLFSQFFSF PRAFRIYVTT SIPVIPSAPC RSLDPSDMLP ADPQPGPILR
AEESQKAVET TKEPISSEND MDEVDLNSND NVAGIGAENG KIPDETETEP TQTDDDDSKS
HSSEQNNKKT LEKTPEVTNQ TSEQSDPVKS EQNTVNGSAD VETATKTESD TVTNGDVVPP
ESESNGGTQS DGQEQAEVQS ESHEQSQNES QIQSEAQSEA HTRQHSVVSI ASATNAATVD
NIKIFKNTFE EIVNSKEAKK NAGLKESVQK ALDSLNNAQS RDAHLIFDAL KETCEKSNSN
ELKAKAIDLF AKLFDYAQFN DENDKAHLTE SSVNVISSCF LGEGTDPDVE LQVVRALMHS
IVLMPCHGAP LLKAVRLIYN VFIFSLSTRN QAVAQGILNQ VIRAIFQRIT DSGIYKNKHN
RSVSNSKLAF RSPSKDDFAT PIDDSREKLT LKNLEKLNDD VEDNDRVDEA NNASELDEDL
VVKDAFLIFR AMCKLSVKDL DSETIDMKSH TVRSKMLSLH IIHTILKDHI EIFLSHDVVI
LSSNSAEQTR LINAVRQYVC LSLSRNAASP LAPVFEISLE IFWLIISNLR SEFKREIPVF
WDEIYFPVAE MRTSTPHQKR YLLSIVERLC NDSRCIIEFY LNYDCDSTMP NICEKTIELL
TKLSLAIVEV TAQQRQAYRE NRRMGISVYN IDKIANLTSS TMSSKPPEPD IYNHFPLEYA
LKMTSINCSV AFLRSLYSWA QKGINNGTSR TLASSQNGSQ AALNRKRSGT VDSANSTLNN
SRNASFVNSS EQYSESDDPE QFENLKQRKK AFLEGIRQFN QKAKKGIKYF LEHKFIDSDS
PEDISKFLLG TEGLDKSVIG EYLGEGDERN IAIMHAFVEQ MEFSNSGFVD AMRRFLQSFR
LPGEAQKIDR FMLKFAERYV LGNPTLYANA DTAYVLAYSV ILLNTDLHSP QVKVRMSVEN
FIANNAGIDD GKDLPLDYLV KIYNEIQSNE IKLQSEQHAA LLAGDISISV STPSVGLFSG
RDLNREAYIH ASKEMSTKTE KLMRNLGKRL KSDDSNGVFY SASHVDHVKS IFDTLWMSIL
AGLTPPFKEY DEEDVTNACL EGIKLSIRIA CMFDLYHAKE SFIGALLQFE NLHNYQEMKA
KSVEAIYIML DLAVTEGNKL TDSWNQILTS ISQLERLQLI AQGVDQASIP DVSTAKLVNR
GSVEASRVST SFFSLFTTVT TASQTASNKF HNQHLSPYVA QLLTKTELDV AIDKVFTNSV
NLTGSSIVDF VSALSEVVKE EIESSGQSSN PRTFALQKVV DICYYNMSRV RFEWTQLWNI
IGETFNAVGC HSNLAISFFA LDSLRQLSMR FLEIEELAHF KFQKEFLKPF EHVIIYNDSL
EVKDMVLECI NNMILARARQ IKSGWKTIFG VLTSAAKENK ESLVMKSYKM ANWINKEFIG
EVHAQDSFAN LVICFTELAK NERFQRVSLL SLDVLLKLIN QIAQSSFGND ELKKTEANGK
EDTVSKNDRL VKVWFPVLFG FHDIIMTGEE LEVRSRALNY LFDILMRYGE YFEDEFWDKI
CRQLLFPIFS VLSNHWEVSL EDSNDKLSVW LSTTLIQALK SMMSLFTHYF DPLSRMLDEY
LNLIISCICQ ENDTIARIGR ECMSTLLKEN ATRFTDEHWI HISGAFTNLF DLTTAKELFT
SDPLLNRVRS QDHENGDVGS QVDLDDPQSP KKTLIDDAEA RLKKSREKSS IVVKSVLQLL
LIQTLSELFE SENFYEAIPY THLIKIAFLL NSSYTFARTF NDDYDLRVRL WNAGVIERLP
NLLKQESSSS AVFINIMFKM YCDDDKTDAS AKKTIMESII PLCNIITERY ADFDENNQQR
NITTWKPVIV EIFHGYVELD DEDFVEHAPT MYKLSLKLFT KNMTADLRQL VRAFLSRVGD
EFIDKVATTN
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