| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28965 |
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| Symbol | CKT1 |
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| ID | 4851705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2597350 |
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| End bp | 2599023 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393413 |
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| Product | choline kinase |
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| Protein accession | XP_001387071 |
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| Protein GI | 126275324 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.265552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA CACCAGCCAA CGTTTCCGTC CAGCCACGGT CTAGATCCCG TTCGAGAACA
AGAAACTCGA CTGCCAACTC GAGATCCACT TCTTCTACAA GAAGACCGTC TGTTGGAAAG
AGATCCTTAT CGTCGTCTTC TTTAACGAAG TTAGTTGTCA CGCCTACCAA CATCGACCAC
GAAAAATCTG TCCCAACTGT CTCAGCGACT TTGGATAATT CTTTGCCGCT CGATTTCTTC
AAACAAGATT TGATTGCTTT GGTCAAGACG TTGAAGATTT CGAAATGGCA CAAGAGACAG
TTGACCATAT CCAACTTGGT GGTGAATAGA ATCTCGGGTG CGCTCACGAA CTCCATCTAC
CGTATCGAGT ACTACGACAG CCAACAGAAC TTGAGCTTGC CAACCTTGTT ATTGAGAGTG
TACGGTAAAA ACGTCGAAGA ACTCATCGAT AGAGACCTGG AATTAGCTAC TTTAATCAAG
TTGTCACAAA AGAGAATCGG TCCTAGACTT CTTGGAATCT TCGCTAATGG TAGATTCGAG
CAGTTTTTAG ACGGATTCAT CACGTTGAAC AAAGTTCAGA TCAGAGACGA AATTATCTCC
CAGATGTTGG GTAGAAGAAT GAAGGACTTG CACTACAAAA TCGAATTAGA CCTTCATGAT
GTTTTGTCCG ATTTGCCTAC AGCTTGGAGA TTGATCTTCA AATGGTTAAA GCTTTTTGAA
GAAGAATACT TGCCAGGATA CACCAAGAAC AACTTTGACC CCAAAGACGT GTTTTTTGTA
GAGTTCGGGA GATTCAAGGA AATCGTCAAT CTCTACAAGA ACTGGCTCTT TGATAAATAT
GACAAGGAAT CGTTTTCGTC CAACTACAAG TTTTGTCACA ACGATACCCA GTACGGTAAC
CTCTTGTTGC ACGAATCGTT CAACCCAGAG GATATACTTG TAGAAACTCC GGTTCCATCT
ACTCCTACGG ACGAGTCGAC TCCTGTAATC AAGTCTACCT CTAACAAAAA CGATAGTAAA
TTAGTTGTAA TTGACTTCGA ATATTCTGGA GCTAACTTCC CGGCTTTTGA CTTGGTAAAC
CATTTCTCAG AGTGGATGGC TGATTATCAT GACGAAGAGA AGTCGTACTA TATCCATGAA
GACAAGTACC CTACTCAGTT GCAGCAGTTG AATTTGATCA AGTCTTACAT CGAATACGAC
TTCCAATTCC CCTCTTCCAA CCTCAAGACG CCAAATACTC CAGAGCAGCT CTTGAATGGG
ACAGCCGATG CCAGTGAGTT GATCCAGTAC GAAATCAAAA AGATGTACAA CGAATGCATC
TACTGGAGAG CCACTGTCCA GATTTTCTGG TGTCTCTGGG GAGTAATCCA GAATGGTCCA
CTCAAGCCTT CTTCCCCTGC ATCGCCTAAT CCTAACGGAT TTGCTGAAGA CGGTATAGAC
AGTACTTACA ACATCATCAC TGGTGTAGAG TCTGTGTCTT TGGACGGAAA CGTAGTTGTA
GAAGAGGCTA TTTCCTCTAG TGATGATGAC TTCGACTACT TGAAGTACTC ACAGCAGAAG
GTTGCTATTA TTGTCGGCGA GCTAATCAGT TTTGGCTTAA TTAAGAAGGA AGAGATCGAC
GAGAAGTATT GGGACATCAT CAAGTATTTG GATGTCAAGA CATTAGATAT TTAG
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| Protein sequence | MDITPANVSV QPRSRSRSRT RNSTANSRST SSTRRPSVGK RSLSSSSLTK LVVTPTNIDH
EKSVPTVSAT LDNSLPLDFF KQDLIALVKT LKISKWHKRQ LTISNLVVNR ISGALTNSIY
RIEYYDSQQN LSLPTLLLRV YGKNVEELID RDLELATLIK LSQKRIGPRL LGIFANGRFE
QFLDGFITLN KVQIRDEIIS QMLGRRMKDL HYKIELDLHD VLSDLPTAWR LIFKWLKLFE
EEYLPGYTKN NFDPKDVFFV EFGRFKEIVN LYKNWLFDKY DKESFSSNYK FCHNDTQYGN
LLLHESFNPE DILVETPVPS TPTDESTPVI KSTSNKNDSK LVVIDFEYSG ANFPAFDLVN
HFSEWMADYH DEEKSYYIHE DKYPTQLQQL NLIKSYIEYD FQFPSSNLKT PNTPEQLLNG
TADASELIQY EIKKMYNECI YWRATVQIFW CLWGVIQNGP LKPSSPASPN PNGFAEDGID
STYNIITGVE SVSLDGNVVV EEAISSSDDD FDYLKYSQQK VAIIVGELIS FGLIKKEEID
EKYWDIIKYL DVKTLDI
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