| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28943 |
|---|
| Symbol | |
|---|
| ID | 4851683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 2533282 |
|---|
| End bp | 2534490 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640393391 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001387059 |
|---|
| Protein GI | 126275249 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5415] Predicted integral membrane metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTGT TCGGTTTCTT CAGAAGAGGA TTCGACCCCG ATTCCTTTGA GAAGGAGTTG
ACGTCGGTGA CAGAATCGAT TTCGAGTACC AACCAGCAGA TTTCGCGATT GAGATTAAGG
TCCAGGTCTA TCCGTAGATC GTTAGCAATA TATCTGCTAA TCGTCTATGT TGGCATCATT
TCGTACGATT ACACTTCATT GCCGTCGCAG GTCGTTGGAC CGGACAAATT GCGTAAGTTT
TTGGCGTATC AAACTAGAAA CCAACTTCTT GTACTCTTGT TATTTCCAGT GGCGGCGTTC
GCTTTGGTCA GAGTAGTTCG TATCTTATTT GATTTTCTCA TCAGAAGTCG AGAAAACAAA
TTGAAGTGGT TGAAGAAGAA GCACAAGGAG AAAATCGAGG AATTGAAGAA AATCACCAAC
TTCACCACAA CTGAAAAACT CTTGAATAAG TACGGAGACA CCCCTAAAAA GCCCTCAATT
ACTCCGAACA ACACCAATAA GAACATTACT GCCAAGCCCA AACAGCTTCC AGCAACTGCA
AACGTCGCCA AACCACCGGC AGGCCAATTG AGTCAACAAG AATTGAACAA ATTGAATCTC
AACATCACTC CTCGGGATGT TGTAGCACCA ACACACACAC CTCAATTTCA ACAAAACAAG
CAGCCGCAGC ATCCACAACA ACAGAAATCG GTGGCTCCTA TTCGTAGATC GATTCAGGAT
CGCCTTTTAG ATATGTTAAT CGGCTCTGAG AACAACGAAT CTGTGGAGTC TCGATATGCT
CTCATCTGCT ACAATTGTTT TACCCATAAC GGTCTTGCCC CACCAGGTAC TAGCGATCCT
GCCACTGTGG TGTATATCTG TATGAAATGT GGAGTCATGA ATGGCGAACT AAATGAAGAA
AAGCTGATAC AAGAGGACCA TGTTGATACG GCTCTGGTTA GTCCGGTTGA CAAGACTCTG
CAATTGATAG ATAACGAAGC AAAGTCGAGT CTGAAAGACA AGTTAGAACA AGTACAAGCA
GAAGTTGAGG AGCGTAAGGA AGAAGTTCAA CAGGAACAGA AGCAAGAAGA AAAACAATCT
GAAGAAGTTC AACAAGAGCA AAAGCAAGAA GAAGAGCAAC CGGAAGACAA AGAAGTAGTT
AAACAAGTGC AACAGCACGA AGAACAAGAA AAACAGGTAT CAGAATCAGA GTCAAAGTCA
GACTCTTAG
|
|---|
| Protein sequence | MGVFGFFRRG FDPDSFEKEL TSVTESISST NQQISRLRLR SRSIRRSLAI YLLIVYVGII
SYDYTSLPSQ VVGPDKLLAA FALVRVVRIL FDFLIRSREN KLKWLKKKHK EKIEELKKIT
NFTTTEKLLN KYGDTPKKPS ITPNNTNKNI TAKPKQLPAT ANVAKPPAGQ LSQQELNKLN
LNITPRDVVA PTHTPQFQQN KQPQHPQQQK SVAPIRRSIQ DRLLDMLIGS ENNESVESRY
ALICYNCFTH NGLAPPGTSD PATVVYICMK CGVMNGELNE EKLIQEDHVD TALVSPVDKT
LQLIDNEAKS SLKDKLEQVQ AEVEERKEEV QQEQKQEEKQ SEEVQQEQKQ EEEQPEDKEV
VKQVQQHEEQ EKQVSESESK SDS
|
|---|
| |