Gene PICST_28914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28914 
SymbolFRM1 
ID4851654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2462524 
End bp2463804 
Gene Length1281 bp 
Protein Length426 aa 
Translation table 
GC content44% 
IMG OID640393362 
Productformamidase 
Protein accessionXP_001386805 
Protein GI126275167 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0986635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATC CAATTCGTTA TGTTACCAAG GTCGACTTGA ACAAGCCAGG TGACGAACAA 
CCTCAAGTAC ACAACAGATG GCACCCAGAT GTTCCCTTTA CTGAAACCAT CAAGCAGGGT
GAAACTGTCA AAATTGAGTG TTTGGACTGG ACAGGAAACC AGATAGTCAA TTCGGACGAC
GCAGACGATA TCAAGAACGT GGACTTATCT AGAATCCACT ATTTATCTGG GCCATTCAAC
ATTGAAGGAG CCAAACCTGG AGATGTCCTT GTCGTAGAAA TCAAAGATGT GCAACCTTTA
GATAGACAGC CATGGGGTTA CTGTGGAATA TTCCATAAAA CTAACGGTGG AGGGTTCCTT
GACAAATTCT ATCCTGAAGC AGCCAAGGCT ATATTCGATT TGGAAGGTAT CCATGCTACA
TCTAGACATA TCCCCAATGT CAAATTCACT GGTCTTATTC ATCCTGGCAT TATGGGGACA
GCACCTTCTG CTGAAGTATT GGCTGAATGG ACTGCACGTG AAGGAAAACT AGTTGCTGCA
GAGCAGCATG CGCACGATAC CGCGGTTGCA AATCTTCCCC TTTCAGTAAA TGCCCATGGA
GGCCTGGCAA CTGGCGATTT GGCTGAAAAG ATAGCCACTG AAGGAGCACG CACCATTCCT
GGAAGACCCG AACATGGAGG TAACTGCGAT ATCAAGAATC TCTCCAGAGG CTCCAAGTGC
TATTTCCCAA TCTACGTTGA TGGCGCCAAG CTTTCTGTAG GAGACTTGCA CTTCTCACAA
GGTGATGGTG AAATATCCTT CTGTGGAGCA ATTGAGATGC CTGGAGTACT CACCATCAAC
TGTAAAGTCA TCCCTGGAGG AATGGAAAAG TTGTCTTTGA AGTCTCCCAT GTTCATTCCA
GGAGATGTCC CCAACCAGTA CGGCCCTTCC AGATACTTGA CTTTTGAAGG TTTCTCAGTT
GACGAGGAAG GTGAACAGAA GTTCTTATGT GCTACTACAG CCTATAGACA AGCCTGTATC
AGAGCAATTG AATACTTGAG AAGATTTGGT TACAACGATT ACCAGATTTA CTTATTCTTG
TCAACTGCTC CAGTAGAAGG ACATATTGCA GGTATTGTTG ATGTTCCAAA TGCATGTACT
ACTCTTGGAA TTCCAATTGA TATCTTTGAA TTCGATATCA GACCTGAAGC TGAGCCAGTC
AAAATCGATC AGGGAAATTG CGCTTTCGTA AAGGGGACAG ATCATCCTGT GACGTATGAC
TTCAAGGATT TCATAAAGTG A
 
Protein sequence
MSNPIRYVTK VDLNKPGDEQ PQVHNRWHPD VPFTETIKQG ETVKIECLDW TGNQIVNSDD 
ADDIKNVDLS RIHYLSGPFN IEGAKPGDVL VVEIKDVQPL DRQPWGYCGI FHKTNGGGFL
DKFYPEAAKA IFDLEGIHAT SRHIPNVKFT GLIHPGIMGT APSAEVLAEW TAREGKLVAA
EQHAHDTAVA NLPLSVNAHG GLATGDLAEK IATEGARTIP GRPEHGGNCD IKNLSRGSKC
YFPIYVDGAK LSVGDLHFSQ GDGEISFCGA IEMPGVLTIN CKVIPGGMEK LSLKSPMFIP
GDVPNQYGPS RYLTFEGFSV DEEGEQKFLC ATTAYRQACI RAIEYLRRFG YNDYQIYLFL
STAPVEGHIA GIVDVPNACT TLGIPIDIFE FDIRPEAEPV KIDQGNCAFV KGTDHPVTYD
FKDFIK