| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28876 |
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| Symbol | CMD1 |
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| ID | 4851615 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2340704 |
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| End bp | 2341348 |
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| Gene Length | 645 bp |
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| Protein Length | 149 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393323 |
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| Product | calmodulin |
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| Protein accession | XP_001387021 |
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| Protein GI | 126275046 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton |
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| COG ID | [COG5126] Ca2+-binding protein (EF-Hand superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.603426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTATGCA TTCTCCATAT ATATAGCTCA GTGCTACAGT CATTATTTGC ATTTTGGAAC
AATCGGACAG CAGTGTAATT TCAGTATCGT CGTCCAGATT AGAACTCTTA GGAAGAGCAT
CTTACATTAT GAACACGTCA GATCCGTTGC ACAACTAGAT TATTATTGTT GCACCGCAGT
ATACTAACCT ATGACCAGGC TGAGAAATTA TCCGAACAAC AGATTGCTGA ATTCAGAGAG
GCTTTCTCCT TATTCGATAA GGATAAGGAT GGCAAGATCA CAACCAAGGA ATTGGGTACT
GTGATGAGAT CCTTGGGCCA AAACCCATCT GAAAGTGAAT TGACAGACAT GATAAACGAA
GTCGATGTGA ATAGCGATGG CTCTGTCGAC TTCCCAGAAT TCTTGACCAT GATGGCCAGA
AAGATGAAGG ATACAGACTC TGAAGCTGAA ATTGCTGAAG CCTTCAAGGT ATTTGATAGA
AACGGGGACG GCAAGATCAG CGCTGCTGAG TTGAGACATG TGTTAACCTC AATTGGTGAA
AAGTTGTCCG ACGCAGACGT TGACCAAATG ATCAAGGAGG CTGACACCAA CAACGATGGC
GAAATTGATA TCCAAGAATT TACTCAATTG TTAGCTGCTA AATAA
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| Protein sequence | MAEKLSEQQI AEFREAFSLF DKDKDGKITT KELGTVMRSL GQNPSESELT DMINEVDVNS
DGSVDFPEFL TMMARKMKDT DSEAEIAEAF KVFDRNGDGK ISAAELRHVL TSIGEKLSDA
DVDQMIKEAD TNNDGEIDIQ EFTQLLAAK
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