| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28851 |
|---|
| Symbol | |
|---|
| ID | 4851597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2254300 |
|---|
| End bp | 2256594 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | |
|---|
| GC content | 42% |
|---|
| IMG OID | 640393305 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386781 |
|---|
| Protein GI | 126274984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0578339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGTT CGAACTCGCG CGGACATCGT CCAGCAGATC TTAAGTCTGC CGCCTTAGAC
CACTCGGCCA ACCCTCCATT TTTCAAAGGC GAAACTAGCA AATATAAATT TAAATTGCAA
ATATCACGTG ATCGTCCACG TGAACCAGTT TAATAAAAAC CAGTGTTTTA TTGATATAGA
CGCCATCAAT CAACTGGAAG GACCTCCTGG AGACTCTTCC CACTTCTACG CTTCAAATAG
TGCTTTAAAA GAACCGAAAC CGCCAGATAT TGGCCGAAAA CGAAAAACCG ACGTCGCACC
CGATGATCTG ATGGACCTTG ATGGCGAGTC CTCAGATGCC GTAGAAAACG ACGAATTGGA
GCCATCTTTC GTGACAGCAG GATCAGTTAT TGCTGATGAC TCTTTTGAAG ATACCCAAGA
AGCCTCAAAT GCCTTGAACA CCTTGAACGA AGCGCCAGAA ATGTCGACTA TGGACAGCTT
TGAAACCTCA GTTTCGAAAA ATTCTTCACA TCACGTGATC GAGGAAGAAC ACGACACAGT
TTTGGCTGCA AAAGGAGATA CTGTTATGAT ATCTCCAAAT CCTACTTCCA GTAGCGATTG
GTCAAAGCCT ACATCCACCA GTGACTCAGT TGAAATTAAA AATGTTTATA TTAAAGAAAA
AAACCCAAAA TCCCAAAAAA ATAACCTTTC AGAAAATGAA GAAATCAAAA AAAATCAGGA
AAACAGAAAA TCAAACAAAC CTCAGGAGCT CCTCTTACTG ATCTGATCTG GAACGGTCAG
AACGCCTCGC TCCAACATCA CAAAAACAAT TCATCAATTA AACTTCTCTC CAAAGACAGG
TTAATCAAGG ATCTTGAAAA ACTCGGATCT GGCTTAAACA AGAATTGGGA AGAAGATAAA
TTCACAGACG ATTTGACCTT TAAGAAGATC AGGAGGTTAG GATTTGCCAA AAACTATGTC
ACTTCCCACT CACAACAAGA ATGAGCAGGC GAACAGGGCA GAATTGACAG ATGGAACATC
CCGCAAGAAT TTCTCATTGA TTCATTGTCA TTCCTTGGAG AACACGAATA TCAAAAACGG
GCAATCGAAT TGAGGATTGA TCGGTTTGAG TACAAGGATA CCCAATTAGA CCCGTCCAAA
GAGTTGTCTT TAAAAGAAAA GCTAGCGGTT ATTGAAGACC ACTTTTCCCA TCTCCCCGAG
AAATTCTCTG AAACAGCTCT TCAGCTCGAA ACCAAATTGA AACAGGTAAG AGCAGCTAAA
ACAAATTTCC TAGACTTACT CGCCAAGGCG ACAGGTGAGG ATAAGGATGC GAGACCACTG
TACCTCAGAG CCATACATGA AAACGAGATA CAAGAAAGAG ATCTCATGGT CCAATTGACA
AAGGAAAACA CCCTTCGTGC TATTGTTCCC TTGATGATGA TCAGACCACT CAGCAACTCT
ACTGCCTATA TGTCCCTCAG TCCCATTGAG GGACCTAAAA CCTCAACCCA GGGACCCAGC
CTTCTTATGT CTCTTAAAAA ATTGTTAAGA CAAGGTTATG AAGGATCAAC TTCCGATTAC
TATTTCAAAT TGAGCATGAT TCCCTCTAAA CCTCTCGCAA ACATGTTTCT TGTCGGACTT
GAACACCCAT CAGATCACAA AAACCCAGAG ATGGCGATCA GTGAATTATT CAATAGAGGT
TCCATGCAAA TTACATCGTC CCATAACCTC AATTTTTCAA AATTCCCATC AGACGTCTAC
TCAGTGGAAG AAAAAGTCAA GTATGAGATT CTCGTTGCCC ATTCAGAGCG CATTCGCAAT
ACATACTATT TAGACAAAGA CAAAGAAAAG AGTAAACTGT TCTACCTCAT TGCAACGGAC
TCTGGCAAAG TCCCTACTCG AAAGAATGCA AATCTTCCGA ACTATAGTCT CGAGATCATT
TCGACTTTTA AATTCTGCAG TTACTGTCAC GAAAGTGATC ACCCAACCTT TAAATGCACC
AAAACGAACA AAAACCGCAC GACGTACTAT CCACCTAGTA CACCAATGGT AGCTACTTAC
ACTCTGAACA GAGAAAGTAC TACAGACAAT GGCAGTAAAT TTCGTAAAGT ACGGACAGGG
GCCTTCACCG AAGTCACCAA GGGCGTAAAA CCCCAGAAAA TCCAACAAAC AATAGTAAAC
AATGGATCAA ATTCATTCAT GAACTTGCCT ATGGAAGAAC CGCCCAGCTC AACCACGGAC
CCGACCAGCA CCACGGCCTT TTCGCGTCAG CCAACAAGCC ATTGGGCATG GTCGGCGGCG
TTACTATACG TCTGA
|
|---|
| Protein sequence | MRGSNSRGHR PADLKSAALD HSANPPFFKG ETSKYKFKLQ ISRDRPHAIN QLEGPPGDSS
HFYASNSALK EPKPPDIGRK RKTDVAPDDL MDLDGESSDA VENDELEPSF VTAGSVIADD
SFEDTQEASN ALNTLNEAPE MSTMDSFETS VSKNSSHHVI EEEHDTVLAA KGDTVMISPN
PTSSSDWSKP TSTKHEYQKR AIELRIDRFE YKDTQLDPSK ELSLKEKLAV IEDHFSHLPE
KFSETALQLE TKLKQVRAAK TNFLDLLAKA TGEDKDARPL YLRAIHENEI QERDLMVQLT
KENTLRAIVP LMMIRPLSNS TAYMSLSPIE GPKTSTQGPS LLMSLKKLLR QGYEGSTSDY
YFKLSMIPSK PLANMFLVGL EHPSDHKNPE MAISELFNRG SMQITSSHNL NFSKFPSDVY
SVEEKVKYEI LVAHSERIRN TYYLDKDKEK SKLFYLIATD SGKVPTRKNA NLPNYSLEII
STFKFCSYCH ESDHPTFKCT KTNKNRTTYY PPSTPMVATY TLNRESTTDN GSKFRKVRTG
AFTEVTKGVK PQKIQQTIVN NGSNSFMNLP MEEPPSSTTD PTSTTAFSRQ PTSHWAWSAA
LLYV
|
|---|
| |