Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28850 |
Symbol | |
ID | 4851596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2253190 |
End bp | 2254023 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | |
GC content | 38% |
IMG OID | 640393304 |
Product | predicted protein |
Protein accession | XP_001387011 |
Protein GI | 126274981 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.038348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAAC TAGTTCTTTT TACAAATATC ATTATGAAGA TGGTCACTTT TTCTCTTTTT GTTGCTTTAC TTGCTTTGAG TCCTGGTCCT TGTGATGCCT TTCTCAACAT CCTCCCCCGA AAGTCGAACA CGAACCCAAA TACTCTTTTC AAAGTTTACA ACGACGTTAG AGGAAACATC AAAACCGTGG AAACATTCAA TGATGTCACA GCACAAGACT TGTTGAGATT TGGGGTTATA AAGATTTTGG AAACCAATTC AGTCATTACT AATGAAGCTT TGGCCGCAAA TGCATTGTCA GAAAACTATT TACCAAGTTA TCAGCATGAC AAGAAATACG AATACAATGC CAAAGAAGGA AAGAATATGT TCTATGAGGT CTCATTCCAG AATCTAGAAT TGGATAGGCA TGTAAATGAC TGGATGCCTC TTGGCACATG TCGTCATAAT CAAGCCTCGA CCCCTTCCAC GTATACCCAG GGTTGGAGCG TGGGAGTTGC TACAGGTGCT AATGCGAAGG TTGAATTTGC TCAAATTTTT GGAATCAAAC CATCATTCCA ATACGATGTT CTGATTTCTG CTGGTCTTAG TGGATCACTT TCATGCAATG TTGATGGTAG AAAGAAACTT CAATTTCAGA TTATGACAGA GTCTGTTACA ATGAAGAACG TGAAGATGAG ACCAATCAAG ATTATCAGAG ATTACAAGTA CACCAACGGA ATCTTTGCAA CTATGGAAGT GGGTGAGTGG GAATACGTTG AAGAATATAC TAGATTGAAC AGAAGAAATG TTCAATTAGG TTGTATTACA GATCCAGAAC AGCTTAGTTG TTGA
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Protein sequence | MIQLVLFTNI IMKMVTFSLF VALLALSPGP CDAFLNILPR KSNTNPNTLF KVYNDVRGNI KTVETFNDVT AQDLLRFGVI KILETNSVIT NEALAANALS ENYLPSYQHD KKYEYNAKEG KNMFYEVSFQ NLELDRHVND WMPLGTCRHN QASTPSTYTQ GWSVGVATGA NAKVEFAQIF GIKPSFQYDV LISAGLSGSL SCNVDGRKKL QFQIMTESVT MKNVKMRPIK IIRDYKYTNG IFATMEVGEW EYVEEYTRLN RRNVQLGCIT DPEQLSC
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