Gene PICST_28850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28850 
Symbol 
ID4851596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2253190 
End bp2254023 
Gene Length834 bp 
Protein Length277 aa 
Translation table 
GC content38% 
IMG OID640393304 
Productpredicted protein 
Protein accessionXP_001387011 
Protein GI126274981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.038348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAC TAGTTCTTTT TACAAATATC ATTATGAAGA TGGTCACTTT TTCTCTTTTT 
GTTGCTTTAC TTGCTTTGAG TCCTGGTCCT TGTGATGCCT TTCTCAACAT CCTCCCCCGA
AAGTCGAACA CGAACCCAAA TACTCTTTTC AAAGTTTACA ACGACGTTAG AGGAAACATC
AAAACCGTGG AAACATTCAA TGATGTCACA GCACAAGACT TGTTGAGATT TGGGGTTATA
AAGATTTTGG AAACCAATTC AGTCATTACT AATGAAGCTT TGGCCGCAAA TGCATTGTCA
GAAAACTATT TACCAAGTTA TCAGCATGAC AAGAAATACG AATACAATGC CAAAGAAGGA
AAGAATATGT TCTATGAGGT CTCATTCCAG AATCTAGAAT TGGATAGGCA TGTAAATGAC
TGGATGCCTC TTGGCACATG TCGTCATAAT CAAGCCTCGA CCCCTTCCAC GTATACCCAG
GGTTGGAGCG TGGGAGTTGC TACAGGTGCT AATGCGAAGG TTGAATTTGC TCAAATTTTT
GGAATCAAAC CATCATTCCA ATACGATGTT CTGATTTCTG CTGGTCTTAG TGGATCACTT
TCATGCAATG TTGATGGTAG AAAGAAACTT CAATTTCAGA TTATGACAGA GTCTGTTACA
ATGAAGAACG TGAAGATGAG ACCAATCAAG ATTATCAGAG ATTACAAGTA CACCAACGGA
ATCTTTGCAA CTATGGAAGT GGGTGAGTGG GAATACGTTG AAGAATATAC TAGATTGAAC
AGAAGAAATG TTCAATTAGG TTGTATTACA GATCCAGAAC AGCTTAGTTG TTGA
 
Protein sequence
MIQLVLFTNI IMKMVTFSLF VALLALSPGP CDAFLNILPR KSNTNPNTLF KVYNDVRGNI 
KTVETFNDVT AQDLLRFGVI KILETNSVIT NEALAANALS ENYLPSYQHD KKYEYNAKEG
KNMFYEVSFQ NLELDRHVND WMPLGTCRHN QASTPSTYTQ GWSVGVATGA NAKVEFAQIF
GIKPSFQYDV LISAGLSGSL SCNVDGRKKL QFQIMTESVT MKNVKMRPIK IIRDYKYTNG
IFATMEVGEW EYVEEYTRLN RRNVQLGCIT DPEQLSC