| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28802 |
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| Symbol | SGE1.4 |
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| ID | 4851551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2113737 |
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| End bp | 2115434 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393259 |
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| Product | MFS efflux transporter |
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| Protein accession | XP_001387647 |
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| Protein GI | 126274828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.211393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.613875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAA GCAACAAGAA AGAGAAAGAC CAAGTGCATA TAGTAGAGAA AGTCAAGCGT
CCTCATAGAG ATCTGGACCT TTCTGATCAG CTAGGTGACG CTCACTTCAA TATTCTTCCA
CAAAGGAGAA TTATTACTAT CTTGTTGATA CTTGCATTGG CCAATCTCGT TTCATTTGCA
GATCAAACTG GTATAACAGT AGGCTTGTCT GCTATCGCTT CAGATTTGAA TTCAGAAAAG
ACTATCAATT GGGCTGGTAC AGCTTCCTTG TTAGCAAATT GTGTTTGCCA AATTTTGTTC
GGACGTCTCT CTGACATATT TGGAAGGAAG AATGTGTTGA TGTGGTGTTT AGCCATCTTA
ATCATTGGAC AGGTTGCATG TTCAACAGCT CGAAATGGTC CTGAGTTCTA TGTATTTAGA
GCATTAGCCG GGATTGGTAA TGGCGGTGTC TCTTCTCTTG GAATGGTTAT TTTAAGTGAT
ATTGTCTCTT TGAAAGATAG AGGTAAATAC CAAGGTATAC TTGGTGCCAG TGTTGGATTA
GGAAATATTG TTGGACCTTT CGTCATGTCT GCATTCGTAA AGCACTATTC CTGGAGGGGC
TTCTATTATT TATTTGCACC CTTAGGCTGC CTTGTTAATG TTGCAATTTA TTTTACCATT
GATGGAAATA CTAAACTTGA CGGTGTCTTG TCTAAGAAAG AAAAGTTCAA GAAGATAGAT
TATTTGGGCA TTATAATTGC TTCGATTGCC TTAACTTGCC TTCTTGTTGC AATCAGTGGT
AGTGGTACTT CATTTCCTTG GGATAGTAAG CTCACTATTA CCTTGTTTTG TGTTGGTGGT
ATTGCATTCA TTGTATTCTT CTTAGTTGAG TGGAAGATTC CGGAGTTGCC AATGATCCCA
TTAAGACTAT TCAAGAGCCC TTCTATGTGC TTGTTGTTTG CTTCCACTTT TTTGTTCGGC
GCTACATACT TCAGTTTGTT GTATTACTTA CCATACTATT TCCAGATTGT CAGGTCTAAA
AGCGAAATAC AAACTTCGGT ATTTATTGTT CCTTTGGTGG CTGCCCAAGC CCTTATGTCT
ATTGTTGGAG GGCAAATCAT CACTCTTACA GGACATTATT TTTTTGTTGT ATGTGGAGGT
TACGCACTTT GGTTAACTGG TTGTGGCTTA TTGATCATCT GGAATGAGCA CACGAGTGAT
GGAGTTCTAG TTGTGGTAAT GTTGATCATT GGCACTGGTG TTGGTTTTTC ATTTCAACCT
TCAATGGTAG CCATCCAAGC CAATTGTAAG AAGGCTGAAA GGGCGGTGGC AATCTCTACC
AGAAATGTTT TGCGTTCCTT TGGGGGTGCC ATTGGTATTG CATCCGGATC TACTATGATT
AGTAACACGT TATTGAACCA TCTCGCACAA ATTCAAGGTC AATCAGACTT AACTGAGGCT
ACGATCGACT ACTTGAAGGA CCATATATAT TCGAAGATAA ACCTTGCTGG GGTTTCGGCA
TCCGAGATTA CGACAATTTC ACAATTGTAC ATCTCGGCAT TGAGATACTA CTACTATCTC
ATCGTCACCT TCATGGGAAT ATGCTTGGTG TGCTCCATTT TCGTTAAGGA TCGGGGCTTA
CAATGCACGG ACGAACACCC TGTCCGTACG AGAAAGGATC TTGAGTCATC TGCATCCTCG
TACACAGTCA ATAGTTAA
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| Protein sequence | MDPSNKKEKD QVHIVEKVKR PHRDLDLSDQ LGDAHFNILP QRRIITILLI LALANLVSFA
DQTGITVGLS AIASDLNSEK TINWAGTASL LANCVCQILF GRLSDIFGRK NVLMWCLAIL
IIGQVACSTA RNGPEFYVFR ALAGIGNGGV SSLGMVILSD IVSLKDRGKY QGILGASVGL
GNIVGPFVMS AFVKHYSWRG FYYLFAPLGC LVNVAIYFTI DGNTKLDGVL SKKEKFKKID
YLGIIIASIA LTCLLVAISG SGTSFPWDSK LTITLFCVGG IAFIVFFLVE WKIPELPMIP
LRLFKSPSMC LLFASTFLFG ATYFSLLYYL PYYFQIVRSK SEIQTSVFIV PLVAAQALMS
IVGGQIITLT GHYFFVVCGG YALWLTGCGL LIIWNEHTSD GVLVVVMLII GTGVGFSFQP
SMVAIQANCK KAERAVAIST RNVLRSFGGA IGIASGSTMI SNTLLNHLAQ IQGQSDLTEA
TIDYLKDHIY SKINLAGVSA SEITTISQLY ISALRYYYYL IVTFMGICLV CSIFVKDRGL
QCTDEHPVRT RKDLESSASS YTVNS
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