| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28766 |
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| Symbol | |
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| ID | 4851516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2034293 |
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| End bp | 2035804 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393224 |
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| Product | predicted protein |
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| Protein accession | XP_001388017 |
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| Protein GI | 126274720 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5182] Splicing factor 3b, subunit 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.194827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCCA AGAGAAGCAA GAACCAGCTT CGTAGAGAAC GGGTGAAGCT CCGAAAGCTA
GAAGCTGACA AGAAAGAAGA TACATTGGAG AGCACTGAAA TACAAAAGCC AGACAAAGTA
AAAGATTCAG AAACGACAAA TAATGACAAT AAAGAACATA GAAATGACAA AGCTCACGAC
ATAGATACCG CTGAAGAGCA GAAAGATTCA GTCGAAAAGT CTGTTGAGAA TCTTGAAGAT
TTTATAGCGA TTGCCAAAGA TTCTTTTCAA TCTGTTCCGG TTAATACTTC AATAGATGAG
TCTCTTTATC AGCAGTTCCA GGGAGTGTTC AGTAAGTTTC AAGGAGCTAC TGTTGCTGAA
GAAGAAGTAG AATCTGTTCC AGAATCCAAA GGTGATGTTC TCTATAATAG TGGGTCTGAT
GAAGAGTCAG AATTGGAGTC CCTGGATTCT GAAGAAGAGG AAGAGCTTTC TAAACGACAA
CTTCGTAAAC GTAACAAAGT GCCATTGGCC TCGCTCAAGG CATCAACTAT ACGGCCACAA
CTCGTTGAAT GGTATGATGT AGATGCTCTG GACCCGTTCT TCCTCGTAGC ATTAAAGACG
AGCCCCAATG CGGTTCAGGT ACCGAGCCAC TGGTCAGCAA AGAGAGAGTA TCTTTCATCG
AAGAAAGGAA TAGAACGATT ACCGTTTCAG TTGCCAAAAT TTATCACCGA TACAGGTATT
CAAGATATGA GACATAGTGA TGATCAAACG TTGAGGCAAC AGCAAAGAGA CAGAGTACAG
CCCAAGATGG GTCGATTGGA TATCGATTAC CAGCGCCTTC ATGATGCTTT TTTTAAATAT
CAGGAAAAGC CACGATTGCT TGGTTTTGGA GATGTATACT TTGAAGGTAG AGAAGCAGCT
GATGAATATA GCAATGATCT CTCTAGCATA AGACCTGGCA AGGTGTCATC TGAGCTACGT
AAAGCTTTAG GTATTCCTGA AGGTGCACCT CCTTGGATTT CCATTATGAA GGATATAGGT
AAGCCTCCTG CCTATTCCAG TCTAGCAATA CCTGGATTAG ATACTTCATA CGATAATGAC
GGCTACAGAG ATAGTAAATC TGTGAACACT AGTAAATTGC ACGAAACAGA ACATTGGGGG
AAGCTAGAGG ACTACGAAGA ATCTGAAGAA GAAGAAGTGG ATGGTGAAGA GGAAGATGAA
GAGCTGGATG CTGACGATGA CGAAATGATT GCATATGAAC AGGAAGAGGA ACAAGCTGAT
GATGAACCTG TGAAGGTGCA GATTTCAGAA TATGGTGGAA TAAAGTCAAG ACCACACAAG
CCTGTTGATG AAAGCAATGA ACACAAGTCG CTTTACACTG TAATCAAAGA GAAACAACCT
CTGGAAGGAG CTGGTCTATT ACAGAGTGGC TTTTCCTACG ACCTCTCCAA AGATTCACAA
GTTGATGAGA CACCTGTTAA ACAGGATACG AAGGTTGAAA CTCTTGAACC TAAGAAGAAG
TTCAAGTTCT AG
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| Protein sequence | MPPKRSKNQL RRERVKLRKL EADKKEDTLE STEIQKPDKV KDSETTNNDN KEHRNDKAHD
IDTAEEQKDS VEKSVENLED FIAIAKDSFQ SVPVNTSIDE SLYQQFQGVF SKFQGATVAE
EEVESVPESK GDVLYNSGSD EESELESLDS EEEEELSKRQ LRKRNKVPLA SLKASTIRPQ
LVEWYDVDAL DPFFLVALKT SPNAVQVPSH WSAKREYLSS KKGIERLPFQ LPKFITDTGI
QDMRHSDDQT LRQQQRDRVQ PKMGRLDIDY QRLHDAFFKY QEKPRLLGFG DVYFEGREAA
DEYSNDLSSI RPGKVSSELR KALGIPEGAP PWISIMKDIG KPPAYSSLAI PGLDTSYDND
GYRDSKSVNT SKLHETEHWG KLEDYEESEE EEVDGEEEDE ELDADDDEMI AYEQEEEQAD
DEPVKVQISE YGGIKSRPHK PVDESNEHKS LYTVIKEKQP LEGAGLLQSG FSYDLSKDSQ
VDETPVKQDT KVETLEPKKK FKF
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