| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28677 |
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| Symbol | HWP1 |
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| ID | 4851435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1807332 |
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| End bp | 1808774 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393143 |
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| Product | hyphal wall protein (putative) |
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| Protein accession | XP_001387580 |
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| Protein GI | 126274563 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.442501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATATCC ACAATACTAT GAAAGGGTTA ATAAGTGCCC TTACTCTTGC TACTGCAGTC
TCGGCTGCTT CTTCAAGCTT CCCAACAATA AGAGTCACAA CAGTATCTAC TGTAGAGTGT
TCCTCCTGTT TGGTGTCCCT GGCTACTTTA TACCAAAACT CTACTACAAA CGCAGGAACC
ACTCTGACTA CCTTACAAGG ACTTGGAGGT ATTGCGCCAG CAGCAGCTTC AGAAGACCCA
GTTTCATCTG ATCCAACTAC TCTGGTAGAT CCAGTGTCTT CAGAAGCTCC AGTTTCGTCT
GATCCAGTTT CTTCTGATCC AGTTTCTTCT TCCGACCCAA CTACTTCTGC TGATCCAACT
TCTTCTGATC CAGTATCGTC TGATCCAATT TCATCTATCG ACCCAGTCTC TTCCGACCCA
GTTTCTTCCG ACCCAGTTTC TTCCGACCCA GTTTCTTCCG ACCCAGTTAG CTCAGATCCA
AGTACTTCTA GTTCAGTTAC TTCCTCCGAC CCAGTCTCAT CCTCTTCTTC AAAGGTCAAG
TCTACTATTT ATGCTTACGA GACCGAAGTA GAAGATGTTG CTTTCGAAGT TACCAGGACT
ATCTGCCCTG ACGATAACGA GTGCTATGTA ACTACCGACT TGGAGTCTTC GACTACTTAC
ACTACCACAG TTGATGGTAT CTTGACAGTT ATTACCACCG GAATTCCAGT GACCAAATCT
GAAGGTACTA CCACTGTCGA TGGCGTTGAA ACCATTTTCA CCACCTACTG CCCATTGACT
GAAACCACCC TGTCTTCTAA AGAGGCTGTA TCAACTGAAT CAACTACTAC TGCCCCAGAG
TCGTCTGCTG CCCCAGTAGA AGATGTCACT GAGACTGAGA TCAACACTAC CGTTATTACC
ATCACTTCCT GTAGCCACAA TGCTTGCAAA AAGATTACCA AGACTACTGG TGTAACTACT
GTCACCGAAC CTAATACCAT CTACACTACA TACTGCCCAT TGTCTTCTGA ATCTATTGAG
ACTAGCTCTA TTGAGACTTC AGTAGAGTCT ACAATTTCAG AGACTACAAC TTCTGCTACC
CCAGAGCCTT CGACTTCTGT TGCAACAGAG TCCACAATTG TTTCAGTGGC TTCGACTTCT
GAAACTCCAG TGGCCGAATC CACAGTTTCA GTTGCTTCAC AGCCTGCATC ATCAGAGGCC
GTTTCTTCGG AGACTCCAGT ACCAACGTCG TCTATTAAGA CTACTCCTCT TTCGACTATT
AACGTTATCA CCAACAACAT TATCACAGAA ACTGCTTCTC CAGTTACTTC GTCTGAAATC
CAGCCTAGCT ACTCAGCAGA ACCATCTATA AATCTCTTCA CATATGAAGG TGCTGCTGTA
TCAAGCATTA GGAACACTGG ATTCCTCAGT ATATTTGTTG CTTTGGCTCT TGCTGTCATA
TAG
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| Protein sequence | MHIHNTMKGL ISALTLATAV SAASSSFPTI RVTTVSTVEC SSCLVSLATL YQNSTTNAGT
TLTTLQGLGG IAPAAASEDP VSSDPTTLVD PVSSEAPVSS DPVSSDPVSS SDPTTSADPT
SSDPVSSDPI SSIDPVSSDP VSSDPVSSDP VSSDPVSSDP STSSSVTSSD PVSSSSSKVK
STIYAYETEV EDVAFEVTRT ICPDDNECYV TTDLESSTTY TTTVDGILTV ITTGIPVTKS
EGTTTVDGVE TIFTTYCPLT ETTLSSKEAV STESTTTAPE SSAAPVEDVT ETEINTTVIT
ITSCSHNACK KITKTTGVTT VTEPNTIYTT YCPLSSESIE TSSIETSVES TISETTTSAT
PEPSTSVATE STIVSVASTS ETPVAESTVS VASQPASSEA VSSETPVPTS SIKTTPLSTI
NVITNNIITE TASPVTSSEI QPSYSAEPSI NLFTYEGAAV SSIRNTGFLS IFVALALAVI
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