| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28643 |
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| Symbol | |
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| ID | 4851406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1732950 |
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| End bp | 1738745 |
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| Gene Length | 5796 bp |
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| Protein Length | 1931 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393114 |
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| Product | predicted protein |
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| Protein accession | XP_001387561 |
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| Protein GI | 126274518 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.272891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGT CCTCGAGCAC CGAGGAGCTC AAGCGATTCT TGCTTCATCT ACCCTCTGAC
TCTAACTATG TCTTTTCTCA AGATATTCGT ACCCAGATCA GACGGGCCTG CTTTCTTGCC
ATCTCCAACA ATGGGCAACA TCTAAACCGC CTCTTTCCCA ACGCCTTCTC AAACAGAAAC
GATCCAAATA GCGAATCGGA AGCGTTATAT TCACTGCAAC ACATGATCGA TGTCGTCGAA
TCAGAATACA ACTGGCTCTT TGCCAACTAC TACAAAATCT CTCTCAAAAA TAGAGATCCC
AAACACGACA CTCATAACCA CCACGCCTTC CATGCCAACC TGCCCTGTGC CCGTATCTTC
CGCAAGGGTG AACCCATTTA TCGGTGTTTA ACTTGCGGTT TCGACGATAC CTGTGCTCTC
TGCTCCCATT GCTATCAACC CGAATACCAC CAGGGTCACA AGGTCCACAT CACCATATGC
CAGCGTGAAA ATGGAGGCGT TTGTGATTGC GGAGATCCAG AAGCTTGGGT CAAGGAGTAT
ATCTGCCCTT ATGCGGCTCA TGATGATGAA AGCATTATCG TCAGAAACGA GAAAATGCCT
GTAGACTTGG AACTGAGCTT TCTCCAGACG ATAGAAACCT TGCTAGATTA CGTTATCGAC
GTTATGAGCC AGTCCGACCA GCAGTTCGAA GATCCGGTAG AAGCAACGGA AGCTAAAGTA
GAACTTAATG CGATCAACAG TACTCTTGAC CCACTGAAAT ACGATTGTAG TACGGATAAC
TTCACCGACG CCAACAATGA GCGGTTCTTT CTCATGGTAT ACAACGATCA AATCAGACAC
TATAGAGATG CAGTCCAGCG TATCCATTTG GCCAGTAGGA AAGTAAAGCA ATTTGCCGTC
ATGGTGACTG AAAAAGTGCA GAACTACGGC AAAGCCAAGG TGATAAGCTC CAAGAATATC
AAGTTATTAC TCGAAAGACA AAAGATTTTG AGTGCTACGG GTCTTTCAAC ATGTATAAGA
TCTCACAGAG ACGTTTTTAG GGAAGATATG TGTGATGAGA TCTTGATCTG GATCAACGAT
TTGACCGAAA GTGAGATGTT CAAGATGAAC AACTCAGCAA AAAATCTTTT TTGTAGAGCT
TTTTGTGAAA AGTGGAAAAG CGGTCTTTTA GTTGCCACTC ATGGAGACAA CTCAAATCAC
CAATATAGAG TTGGAGCGCT AGATGCCTGT TCAAAAATCC CCAAATTGCC GTCTTCTAAT
ACTGATAGAA AGACTCAACT ACATTGGTTC TTTCAACCTT CAAAATGGAA CTTACCTGAA
GACATTTGCA GAGAATGCGA TTACAATTTA ACAGAAGAAG ACTACGAGCC ACATACTAGT
CACTTGGGAT CTCGTCTTCA GTATCTTATT TATTTGGATG TTAGATTCTG GAAGTCTATC
AGAATCTATT TGCATGATAT GTACTCGACT TCATTGATCA CAAATTTATG GTATAAGCAT
ATCATTTCCT GTCAATATGT GGACATATAC CCTACCATTG CTGACATGTT CTTGACTATG
GACAGAGAAC CAGAGCTTAA TGTTATGTGT ACGTTGTCTA CTCAGCTCTT CACGTGTCCT
TCTAACTCCA CTTCGATTGT TCAGCATGGT GATGTTTCGC GAATTTTTGC GTCCATATAC
GGTTTCTTAA CTATTGAGGA AATCAGGTCA CCTGAGTGTG TTGAAGTAAC TCAAGAGATA
TCGATGAAAA GTTTGAAGAA CAGGATATGG GGCCAGATCT TCTTTGATAT TGGTTACATA
TTGAGTAGAT CTCGCGATTC AAAGTATATT TTGACTAGCA ATATCATCCC CATGGCATGC
GACATATTGG CATTATTTCA AGGTCGTCCG GTGATGAAAA GAGAAAAGAA GAACCATGTG
GAATACGAAA GTCCCGATTA CACTGCATTT TTCCATGCCA TACTGGTCAT CTATCAGTTT
GGAGAATACA TAGCCCATTC TTTGTCCAAT TTAGGAGATA TTGACCCTGA ATTGAGGACA
TCCCTTAGTA AGAATGCTAT TAAATATGTC ATCAGCTTCT TGCTTAAGTT AGAAAACAAT
GACTACCCTG GTCTTATTGA TGAATACGTT GACATTAACC TATCAATCGA CAAAAAAATC
TCAAAGGAAC CCATAGGTGG AAATATCATC CAGTATTATA GAATTGACGA GGAAAAAGTC
AGTTTCTTGC ATCCAATTCA TTCTTTCTTG AGTTGGTTGA TAGAACTCTC TGATTTCAAG
TCTCCTTCGG AAATTGTTGA AGTGCTTAAC TCATCGACTG ATTTCTACAG CATAACCTCT
AGTGTTGATA TTCCTAACCA TTTGACTTCT ATCTTTGACT ATCCCATTAG AACAATAGTA
CTTATGTCAC AAATTAAGTC TGGTTTCTGG GTGAGAAACG GGTTCAGTGT CAGATCTCAA
TTACAGCTTT ATAGAAACAC AGGATTGCGT GAAAGTGGGT ATATGAGAGA TCTTTTCCTA
ACACAAGTAT TCATCAACTC AAATAGTCCT AACCTTGTTT GCTTCCTACT TTTCAGTCGC
TGGTTATTAA TGGACGGATG GTTGATTGAC AGCAGAACGG TAAGAAATGA AGTCACTGAT
CTAGATTTGC AAGTTTCAGC GGATCTGTCG GCATTGTGCT ACGACCTGAA GACCTTACCA
TACATGTTAG AGGAATGCAT GAACTTCTTC ATTCATGTCT TGACTGAAGA TCTTTATTTG
CGTGGTCTCA AAGATGAGGT TATGATCCAA ACAAGAATCA AGAAAGAGAT TGTTCACAAT
TTGTGCTTCG GACCAATGAG TTACACGAAG TTGTGCTCTC AAATTCCGGA TCATATCTTG
TCAGAGAAGA GATTTGATCT AATATTGGCT GAAATGACAA CATTTACAGC CCCAAATGGT
GCAACTGACA TTGGTGTTTA TCATCTCAAA GATGAGTTTT ATGATCAGAT AAACCCATAT
TATTTCAACT ATACCACAAA TACAAAGGAT GATGCAATTA AATTCGTGAA GGAAAGAATT
CATAAGACCA CAAGAAAACC AATTACTGAA ATTGTTATCG ATCCTAAGTT GAGGGACCCT
GGCGAATTGG GAATTTACAG ATATATTGGA AACTTTTCAG CCTCTGCTTA TTTTTCCGAT
TTCTTAATTA GGACTTTGTC GTACATAAGC AAGGAGGGAA TTGAAGAGGT TGAAAGTTTG
CTAGAAACTG CATTACACTT GATACACATC TGCGCCTTTG AAAATACAAT CGACATCAGT
CAATACGGCA CATTCTATGA CAGATTTGTC AATATATCAG ATGCATACGG AACATCGATT
GCAGTGTTAC TATACGAAAT TTTAGCAAAT GACCAGTTCA AAAATCACCA TTCAAAAATT
CGTTGTATTT TGAAGGTCTT TGAGGACAAG TACCAGAATT TGGGCAAGAT CTTGAGTGAT
CAAATTGTAG ATTATAATCC GTTGGTGATT GAGTTTCACA CAAAGATGGA TAATGATGAA
AACGAATTCG AGAAGAAAAG ACGTATGGCG AAAGAAAGAC AAGCAAAATT AATGGCAAAA
TTTAAGAAGC AACAGTCCCT GTTCCTCAAG AAGAACAACA TGGAAAGGAA TTACTGCAGT
GATATTGAAA TGGAAGACTA CGAAGATGAA CATGGTTGGA GATTTCCAGA ACCCCATTGT
TTGCTTTGTC AGAATGCGGC AGAAGACGCT GGCCCATTTG GTATCATTAC TTACATCTCC
AAATCATCTG AGTTTCGCAC CATCCCTTTC AATGACAAAT TTTGGGTTTT GAAGGCATTT
TCTGATAATG CTAGTTCAGA TGTGAACGAA AATGCAGGAG ACCCAGTAAT TGAAGAAGTC
AAAAGTGAAA AGTGGCATAG GTTTATGGGC AAAATCAAGG AGAGCAATGT TATTGGCCCA
GGATTCTCGC ACAATGATCA TGTTGAAAGC AAGTTGGTTT CGCTGAGCTG TGGGCATGGA
ATGCACTTTC AATGCTACAT GAACTATTTG AATAGCAACA AGAGTCGCCT GAATCAAATC
ACTAGAAATT CACCGGAAAA CGTTGAAAGA AAGGAATTTC TTTGTCCTTT ATGTAAGGCC
ATAAATAACA TGTTCATTCC AATATTATGG ACCTCCAACA AGAGACTGTT GTCTCAATTT
TTGAAACCTT TGCTGTTGCC AAATCCGTTC GATCACATTG ATCCAAAAAT TGTTCATAAT
CAGGATTGGT ATAAAGAATT TACATTCATA TCCGATAAGG ACATTGAAGA CATGTCCATT
TTGACTAAAG CATCCACGGA TATAATTTCT CTGTCATCCA ACAACGACTT CACCGGATCT
CAGCACAGCT TCAGGGTTCT TTTGAGCAAT ATGTTCCAGA TTTTGTCACT TCTTACATTC
CCTCAAGTTT TTAAGGCTGA CACAGTGTTT GTTCTTCTGA ACACGATTAA GTCAATTGAA
ATATCATTGA GGGGAACATC CGCAAGGGGT GAGCTGATCA TATATCAATT GTCCAATAAC
GCTTTGATCA ACTTGAGAAC ATTAAATGAA TTCCGTAATA CATGCGTTCT AATGAAGATC
AAGAGCTGGA TTCATACTCC CAATCCAAAA GGAGACGCCT ATGCCAAGAT GTTGGCCAAT
ATCTTCTCGT TATCAAATGG CTCTATTAAT TCATCCATTC TTGAGGCCGA CTTCTTCGAA
TCGTTAGTGA ACATTCTTCC TTTGCCGTCT TCTGGTTTTT CATTTAACGC CATATTAAAC
ACATGTTTCA CTGGTCACCT TATCCAGTGT CTCCATATAT TGACTAGAGA AATTGCCTCT
CATGATTTCT ATAAAAGTCA GGATTATTCA GTTTTGGATA TTCCTGTAAT AGCCGATGTT
GATATTAACA AGTCTAAAGT TGCTTTGTTA GCTTTCCATA AGTTGAAATT GTCTGAGGAT
TTCCATGGAG ATGACGCATC CATTGAAAAT GACGAAAAAT TTGGACAGGT GATATACTCA
ATGTTAGTCA AGGCAAGTAC ATCATTCTTG AGAAGGGCAG CTATTTTTGC ATACGTTCAA
TGTGCCAACG TAGAAAAACT TGATGTTTCC TCCGTAGAAG ATCTAAGAGT TGAAGCTGAT
AGACTCTGTT CTTTCTTGAA TATCAAGACA ATCGGCGAGT ATCTAGAATT GTTTATTTTG
CCAAATAAGT CATACGAAGG TTGTGTCTTT CAAGGGTTTG TTGATTATGC AAGGAATTTG
AACAAACCTG GATTTGAAAA CTCAGAGACA AGAAAGGGAT TAGAATATCC CGGAATGATT
AGATTGACAG AACTTCCAGA AAGATTGGAC CACTTTTTCA CAAGATATTA CTATCTGGAT
AAGTACAACA ATCCACACAT GACAATTGAA GATCCTGCCA TTTGTCTCTT CTGTGGTGCC
GTTGTCGATG CTCAAAAGCC AGCCATTGGT TGCAAGGAGG GCCAGTGTAC GACACACTAC
TTAAAAGAAT GTGCACATGA CGTTGGAATC TTCCTATTGC CCAAAGAGCG AAGCATGTTG
TTGTTGCACA AGAATGGAGG CACTTTCTAC AATGCTCCTT TCTTGGACCA ACATGGAGAG
TTAGCAGGAG AGTCAAAAAA GGCAAAGACA CTCCACTTGA TGAAAGCAAG ATATGACGAG
TTTATTAAGA ACGTTTGGTT GCTGCACAAT ATCCAAAACA TTATCGCCAG AAACTTAGAA
CGTGTTCTTG ACGCTGGAGG CTGGGATACT CTATAG
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| Protein sequence | MATSSSTEEL KRFLLHLPSD SNYVFSQDIR TQIRRACFLA ISNNGQHLNR LFPNAFSNRN
DPNSESEALY SLQHMIDVVE SEYNWLFANY YKISLKNRDP KHDTHNHHAF HANLPCARIF
RKGEPIYRCL TCGFDDTCAL CSHCYQPEYH QGHKVHITIC QRENGGVCDC GDPEAWVKEY
ICPYAAHDDE SIIVRNEKMP VDLELSFLQT IETLLDYVID VMSQSDQQFE DPVEATEAKV
ELNAINSTLD PLKYDCSTDN FTDANNERFF LMVYNDQIRH YRDAVQRIHL ASRKVKQFAV
MVTEKVQNYG KAKVISSKNI KLLLERQKIL SATGLSTCIR SHRDVFREDM CDEILIWIND
LTESEMFKMN NSAKNLFCRA FCEKWKSGLL VATHGDNSNH QYRVGALDAC SKIPKLPSSN
TDRKTQLHWF FQPSKWNLPE DICRECDYNL TEEDYEPHTS HLGSRLQYLI YLDVRFWKSI
RIYLHDMYST SLITNLWYKH IISCQYVDIY PTIADMFLTM DREPELNVMC TLSTQLFTCP
SNSTSIVQHG DVSRIFASIY GFLTIEEIRS PECVEVTQEI SMKSLKNRIW GQIFFDIGYI
LSRSRDSKYI LTSNIIPMAC DILALFQGRP VMKREKKNHV EYESPDYTAF FHAILVIYQF
GEYIAHSLSN LGDIDPELRT SLSKNAIKYV ISFLLKLENN DYPGLIDEYV DINLSIDKKI
SKEPIGGNII QYYRIDEEKV SFLHPIHSFL SWLIELSDFK SPSEIVEVLN SSTDFYSITS
SVDIPNHLTS IFDYPIRTIV LMSQIKSGFW VRNGFSVRSQ LQLYRNTGLR ESGYMRDLFL
TQVFINSNSP NLVCFLLFSR WLLMDGWLID SRTVRNEVTD LDLQVSADLS ALCYDLKTLP
YMLEECMNFF IHVLTEDLYL RGLKDEVMIQ TRIKKEIVHN LCFGPMSYTK LCSQIPDHIL
SEKRFDLILA EMTTFTAPNG ATDIGVYHLK DEFYDQINPY YFNYTTNTKD DAIKFVKERI
HKTTRKPITE IVIDPKLRDP GELGIYRYIG NFSASAYFSD FLIRTLSYIS KEGIEEVESL
LETALHLIHI CAFENTIDIS QYGTFYDRFV NISDAYGTSI AVLLYEILAN DQFKNHHSKI
RCILKVFEDK YQNLGKILSD QIVDYNPLVI EFHTKMDNDE NEFEKKRRMA KERQAKLMAK
FKKQQSLFLK KNNMERNYCS DIEMEDYEDE HGWRFPEPHC LLCQNAAEDA GPFGIITYIS
KSSEFRTIPF NDKFWVLKAF SDNASSDVNE NAGDPVIEEV KSEKWHRFMG KIKESNVIGP
GFSHNDHVES KLVSLSCGHG MHFQCYMNYL NSNKSRLNQI TRNSPENVER KEFLCPLCKA
INNMFIPILW TSNKRLLSQF LKPLLLPNPF DHIDPKIVHN QDWYKEFTFI SDKDIEDMSI
LTKASTDIIS LSSNNDFTGS QHSFRVLLSN MFQILSLLTF PQVFKADTVF VLLNTIKSIE
ISLRGTSARG ELIIYQLSNN ALINLRTLNE FRNTCVLMKI KSWIHTPNPK GDAYAKMLAN
IFSLSNGSIN SSILEADFFE SLVNILPLPS SGFSFNAILN TCFTGHLIQC LHILTREIAS
HDFYKSQDYS VLDIPVIADV DINKSKVALL AFHKLKLSED FHGDDASIEN DEKFGQVIYS
MLVKASTSFL RRAAIFAYVQ CANVEKLDVS SVEDLRVEAD RLCSFLNIKT IGEYLELFIL
PNKSYEGCVF QGFVDYARNL NKPGFENSET RKGLEYPGMI RLTELPERLD HFFTRYYYLD
KYNNPHMTIE DPAICLFCGA VVDAQKPAIG CKEGQCTTHY LKECAHDVGI FLLPKERSML
LLHKNGGTFY NAPFLDQHGE LAGESKKAKT LHLMKARYDE FIKNVWLLHN IQNIIARNLE
RVLDAGGWDT L
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