| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28506 |
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| Symbol | VSP71 |
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| ID | 4851280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1396585 |
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| End bp | 1397259 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392988 |
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| Product | Predicted BBOX Zn-finger protein |
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| Protein accession | XP_001387913 |
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| Protein GI | 126274266 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGTCG AGGAAGTGCC GAAGACGTCG AGCTCGAATA GCTCGACTAT CTATTTCACT
TCTTCGATAA ATCTCTCAGC CAGATCAGTT CACCGTGGAG GAGCAACTGG AGATGAAGAT
TCTGTTGGTT CTAATAAAAA AGGAAGAGCT AAAGTCAACT ATAATGTCAA TCTATTGATG
AATGCGCAGA CACAAATAAA CGATGAGCTG AATACGGGTC CTTTGAAATC TGCTCAGCAG
GTTCAATTAG AGAGGTTAGT ATCCAGAAGA CTAGTAGAAC TAAACAAGGA ATCTGCTACA
GCCTCTTTCG AGATCCCCAA AAACTTTGCT TACAATAGCA TACATTCTAA TTCCAACAAG
AGCCGTTTGG GCCAGACGCC TACTACAAAG AGAATTCTTG CTGCTCGTCG TAACTTGAAT
CTGTACTTTG AAGAAGAGCG TAACTTGATG TCTATCAACA CAATTCTTGG AGTAAATTTC
CAGTTCATCG ACTTTGCCGA GGTCGAAGCA GCTCCTAAAA TCAAGCGAGC TAAAGTGGAC
AAGATATATA GACCCAGATT ACGCTTGTGC TGTATTTGTG GATCCCAGTC TCACTATTCG
AGATGCTCTA ATTGTGGTTT GTACTATTGT AGTGTTCAAT GTAATAATAT CCACATGGAG
CTGAGGTGTA CATAG
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| Protein sequence | MLVEEVPKTS SSNSSTIYFT SSINLSARSV HRGGATGDED SVGSNKKGRA KVNYNVNLLM
NAQTQINDEL NTGPLKSAQQ VQLERLVSRR LVELNKESAT ASFEIPKNFA YNSIHSNSNK
SRLGQTPTTK RILAARRNLN LYFEEERNLM SINTILGVNF QFIDFAEVEA APKIKRAKVD
KIYRPRLRLC CICGSQSHYS RCSNCGLYYC SVQCNNIHME LRCT
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