| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28429 |
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| Symbol | AMB1 |
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| ID | 4851207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1196174 |
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| End bp | 1197472 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392915 |
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| Product | beta alanine synthase |
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| Protein accession | XP_001387458 |
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| Protein GI | 126274193 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.406154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0472974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTTCA AATCGTTAAA ACTTACCCCC GGCAGATTGC TTGCTACCAT TCATGACACG
GCTGAGAAGT TCGGTGCCAA AGGAGTGTGG GGCCCAGCAT CGACTGAAAC TGGAGTATGT
CGTCTCACGT TAAGCGATCT TGACAAAGGA GTGAGAGATT GGTTTATCGC GGAAACGAAA
GGCTTAGGCT GCGAAATCAA GGTCGACCAG ATCGGTAATA TTTTTGCCAT ATACCCAGGG
AAAAAAGAAA ATGCCAATGC TCTCCCAACA GCCATTGGGT CTCATTTGGA TACCCAGCCT
ACTGGGGGAA GATACGACGG GATCTACGGA GTGTTGTCTG GGTTGGAAGT GTTGAGAACA
CTAAAGGACA ACGACTTTGT GCCCAACTAC CCAATTGCGC TTATAGACTG GACCAATGAA
GAAGGTGCCA GATTCCCCAT GTCGATCATG GCCTCGAGTG TATGGGCTCA AAACATTCCT
TTGGAACGGG CCTATAAGCT TGAGTCAGTG ACAGATGCCG AGCCTGTAAC TGTAGAACAC
GAGTTGAAAA GAATCGGCTA TTTGGGTGAA ACTGCAGCCA GTTACCTTGC CAATCCCATT
AAAGCTCATT TCGAGATTCA TATTGAGCAG GGCCCTATTC TTGAAGACGA GGACAAACTC
ATTGGTATCG TCACAGGAGT CCAAGCATAT TCTTGGATCA AGGTAAAAGT ATTTGGTAAG
GCACAACATA CAGGGACTAC ACCTTTGGCA GCTCGTTCTG ATGCCTTGTT AGCAGCTTCC
AAGATGATTG TCAAAGGTAA CGAATTGGCC AAGAAACATA ACTGTTTATT CTCTGTAGGT
GTTCTCAATC TTCAACCAGC TGTAGTCAAT GTGATTCCCG AACATGTCGA GTTCATTATC
GATGTACGTC ATGTGAAGGA TGATGGTTTG AGCGTAATTT TGGAGGAGAT CAAGTCGGAC
TTTGTTCTGA TTGTTGGTGA TTCTGGAAGG GCTTTGACAG TCGAGTTTGA CCACATTTAC
ACTTCAGATG CTGTCAAATT CCATGAAGAC TGTATTTCTA GTGTAACCGA ATCAGCGGAA
GAGATAGTGG GAAAAGAGAA GGCTCGTACT ATCATCAGTG GTGCTGGTCA CGACTCATGT
GCTACAAGTA CTAGAGTACC TACGTCGATG ATCTTCATTC CTTCGAAAGA CGGAGTCAGT
CACAACCCTG CCGAATACAG TAAGCCGGAA GAGGTCCACA CTGGATTTGA AGTATTGCTT
AATGCGGTGC TCAAGTACGA TAGCAAGAGA ACTGATTAA
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| Protein sequence | MSFKSLKLTP GRLLATIHDT AEKFGAKGVW GPASTETGVC RLTLSDLDKG VRDWFIAETK
GLGCEIKVDQ IGNIFAIYPG KKENANALPT AIGSHLDTQP TGGRYDGIYG VLSGLEVLRT
LKDNDFVPNY PIALIDWTNE EGARFPMSIM ASSVWAQNIP LERAYKLESV TDAEPVTVEH
ELKRIGYLGE TAASYLANPI KAHFEIHIEQ GPILEDEDKL IGIVTGVQAY SWIKVKVFGK
AQHTGTTPLA ARSDALLAAS KMIVKGNELA KKHNCLFSVG VLNLQPAVVN VIPEHVEFII
DVRHVKDDGL SVILEEIKSD FVLIVGDSGR ALTVEFDHIY TSDAVKFHED CISSVTESAE
EIVGKEKART IISGAGHDSC ATSTRVPTSM IFIPSKDGVS HNPAEYSKPE EVHTGFEVLL
NAVLKYDSKR TD
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