| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28393 |
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| Symbol | SPT20 |
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| ID | 4851170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1105477 |
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| End bp | 1107840 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392878 |
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| Product | histone acetyltransferase SAGA complex member |
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| Protein accession | XP_001387440 |
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| Protein GI | 126274156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.3451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG GCACGGCGGT CTCGCCCCAG CGGCCACCGC AGCACCAGCT CAGTCCTGCC
CAACTCCAGA GACAACTGCA ACAGGCCCTC ATCCAGCAAC AGCAGCAAAA GCAGCAGCAA
CAAACCAGAC CCAGACCCAA CATCCAGAAC TACCATTTTG CCACTCTGTC AGCAGATATT
CTCCGGAAGT ATGCAAAATA TCCTGCTTCT ATTACACTTC ACATATACGA AACCCACTAC
CGCTTCAACA ACTCGCTGGA TTCCAACATA ATACCCAAGA ACTCGCCAAT GATCAAGGAC
TTTTTGCACC ATGTGATGAA GGAGCAGATT CCCGTAGAAA TGAGCGAGTT GCTCAAAGAC
TTCTCCATCA AGTCTTACGA TGGCTGCCTA ATTCTTCAGG TGTTTGATCA TCGAAACATG
GTATCGACTA CAGCAGGGGT GACAAAAGCT GGTTCAAGTG GAGAATCCAA AGATGTGAAA
AAAGAGATCA TAGCTAATGG TTCAGCAGAT AATGCTGTTG CTAATAGTTC GAGTGGTTCT
ACTTCAGCTT CAGCTGCGGG CACGAACTCC ACAGCAACAG CATCGGCTTC AACAACAGCA
GTTTCATCGG GATCTTCTCC TGCTACTGCA TCTGGCAGTG GATCTTCCGC TGGAACTGCT
GCTTCAACCA TACCTAAGCC TAAAACGTAT AGAACTTTAC TTCGTCCTAC GCAGCTTTCT
CTATACTACG ATTTATTGTA TCATACCGAT TCAGCGTTGA CCAAATTCAC CGACTCCTTA
TCTCTTCAGA TGGAGTCGGA GATTCTAACT TTGACTAACC GGAAGTTGGA TCTCGCTGTA
CCTTTAAATC CTTATCTATG TGACGAGTAT CTTCGTCCCG AGCCTGAATA CCCCAAGAAA
GTATGGGATG AAGCAATTCA AGACTACAAG CTTATTCATC TGCATCGTGA AGCCGCGGAT
CATAAATCTA GGAAGATCCA TCTGGACGAG ATGGTGCTTC ACAAGACTTC TGAATATGAA
GAAATTATGT TACTTTTGTC TAACAAGTAC AAGAGACCAG ATGAGTCTCA AGATAAGAAG
TTGATAATTG TAGGTCCTTC GGCTCTGGCA GCAGCAGCCG CTACTACCAC TACTCCAGCT
AATCCACCTA AATCAACAAG TAAGGAAGGT ACTTCTGGAC CGGATTCGAA GGTTAAAAAA
GGTGAGGATT CTGCTCCATC TATTCCAGCA GTTCCGGCAG TTACTCCAGC GCAATCTACT
ACGAGAAGTA CTGGTCAATT CATGAGATTG AGACTAATCG AAGAAATAAG AAAGAAGAGG
GAAGCAGAAA GAGCTCTGCA AGAAGCCAAA CTACAGGCCC AGACTCAGGC TGTTCAGAGT
GATGGAAATC TAGCACTCAG TTCCGTCAAC CAGACACCAC AGGATAAGCG AAAATTGGCA
GAAATGGAAA TACAACGTCA ACAGCAACTT CAGCAGCTGA GCCAACAACA ATTGCAACAG
TCTCCACCTT CACAACAGGG CCAGCCTCAA CAGAAGAAAT TGAAGAAAGA ACCTGTAAAG
TCTCAAATGC CTCAGCAAGT ACAACAGTTT GGTAACAATA ATGGTAATAA TAATAGTAGC
AACGGAGGAG GAATTGTGAC TCCACAACAG AATAACATTC CCGTTGCTCC ACAACCAATA
AGGAATGGAA CAGCCTTAGC TGCTCAACAA CAGCAATTAC AGCAGCAAGC ACAGCAGCAA
GCACAACAAC AAGCACAACA GCAAGCACAG CAACAGCAAC AACAGCAGCA ACAGCAACAA
CAACAGCAAC AACAGCGTAT GGTTCAGAAT ACTTCAGCTC CAGGAAGTCT GCAATCTTCT
CAACAAAGCT CTAGCCAAAC TAGTGGAAGT GCTTCTTCTG GAAGTGGACT GCAGCCCACT
CTTTTGCAAC AGCAACAGCA GCAGATTTTC CAGAACTCTT TAACTCCTGA AGAGCAACAG
GTGTTTAGAC AATTGCAACA GAGAATGAAC ACTTTTGCCG TAATGGGAAA TACTGGGGTA
GCACCAAATA GACAACAATT GACACCACAA CAACAACAAC AAGCCCAACA ACAAGCCAAG
GCAATACAGC AGCAGTTGAT GCAGAAATTC CCTCTCTACT TCCAGCGTTT GCGTCAATTC
CACCTTATCC AACAACAGAG ACAACAGAAA CAAAAACAGA TCCAAGAGAA ACAAATGCAA
GCAGCTGCTG CAGCAGCTGC TCAGTCAAAT AATAATGCTC GTTTTAACCA GCAGCAACAT
CCTAACATTT CTGGAAAGAT TGTCCCAGGC TCTTCTCAGC TGCAAGCAGA CAAGAAGAAG
AGGAACTATA AGAAAAAGAA TTGA
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| Protein sequence | MNNGTAVSPQ RPPQHQLSPA QLQRQLQQAL IQQQQQKQQQ QTRPRPNIQN YHFATLSADI
LRKYAKYPAS ITLHIYETHY RFNNSLDSNI IPKNSPMIKD FLHHVMKEQI PVEMSELLKD
FSIKSYDGCL ILQVFDHRNM VSTTAGVTKA GSSGESKDVK KEIIANGSAD NAVANSSSGS
TSASAAGTNS TATASASTTA VSSGSSPATA SGSGSSAGTA ASTIPKPKTY RTLLRPTQLS
LYYDLLYHTD SALTKFTDSL SLQMESEILT LTNRKLDLAV PLNPYLCDEY LRPEPEYPKK
VWDEAIQDYK LIHLHREAAD HKSRKIHLDE MVLHKTSEYE EIMLLLSNKY KRPDESQDKK
LIIVGPSALA AAAATTTTPA NPPKSTSKEG TSGPDSKVKK GEDSAPSIPA VPAVTPAQST
TRSTGQFMRL RLIEEIRKKR EAERALQEAK LQAQTQAVQS DGNLALSSVN QTPQDKRKLA
EMEIQRQQQL QQLSQQQLQQ SPPSQQGQPQ QKKLKKEPVK SQMPQQVQQF GNNNGNNNSS
NGGGIVTPQQ NNIPVAPQPI RNGTALAAQQ QQLQQQAQQQ AQQQAQQQAQ QQQQQQQQQQ
QQQQQRMVQN TSAPGSLQSS QQSSSQTSGS ASSGSGLQPT LLQQQQQQIF QNSLTPEEQQ
VFRQLQQRMN TFAVMGNTGV APNRQQLTPQ QQQQAQQQAK AIQQQLMQKF PLYFQRLRQF
HLIQQQRQQK QKQIQEKQMQ AAAAAAAQSN NNARFNQQQH PNISGKIVPG SSQLQADKKK
RNYKKKN
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